Trifolium pratense (red clover): 123883278
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Entry
123883278 CDS
T08949
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
123883278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123883278
04121 Ubiquitin system [BR:
tpra04121
]
123883278
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123883278
Membrane trafficking [BR:
tpra04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123883278
Ubiquitin system [BR:
tpra04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
123883278
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123883278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
123883278
NCBI-ProteinID:
XP_045787980
LinkDB
All DBs
Position
LG5:54949920..54954262
Genome browser
AA seq
246 aa
AA seq
DB search
MDLKEAVKDKIPWDGTLPLNEFSLSASTFSDKWKMFNHSFPPWLWNPCPKHHLNSSHKVE
GYLSLENVCLVKSCEEEKNHGSLSWKAESNISQAEEPFDHATLVCPEFEANHYDFHIVYS
PSYRVPVLYFRSYYSDGQPLPLSEIEKDLPGHSAELLLESKWTFITQEEHPYLNRPWYKL
HPCGTRDWMKLLLSDTYTSSNKNFIEQYLVSWFSVVGQVVGLKISLEMLNIEEKKLFETT
ASDIFE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggacctcaaagaagctgttaaggacaaaatcccatgggatggaactctccctttaaat
gaattttccctttctgcttctacattttctgataagtggaaaatgttcaatcattcattt
cctccatggctgtggaacccttgtccaaaacaccatttgaattcttctcataaggtggaa
ggatacttatcacttgagaatgtgtgtcttgtcaagtcatgcgaggaagaaaagaaccac
ggaagtctgtcatggaaagcagagagcaacatctcacaggcagaagagccctttgatcat
gcaactttagtttgtccagagtttgaagcaaaccactatgattttcacattgtctacagt
ccatcatatagagttccggtgttgtatttccgttcatactatagtgatggacagcctttg
ccgctcagtgaaatcgaaaaggatcttcctggtcattctgcagagttgctactagaatca
aaatggacatttataactcaagaggaacatccatatttgaatagaccatggtacaagtta
catccatgtgggacaagggactggatgaaactgcttttaagcgatacatatacatcttcg
aataaaaactttatcgaacaatatctggtgtcttggttttcggttgttggtcaagtggta
ggccttaaaatctctttggaaatgttgaatattgaagaaaaaaagttgtttgaaactaca
gcatccgacattttcgaatag
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integrated database retrieval system
