Trifolium pratense (red clover): 123883558
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Entry
123883558 CDS
T08949
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123883558
Membrane trafficking [BR:
tpra04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
123883558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
DUF3896
Laminin_II
Prominin
DUF6988
EcsC
MCPsignal
GP68
DUF7605
VBS_C3G9
ING
Zw10_N
Occludin_ELL
Seryl_tRNA_N
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
123883558
NCBI-ProteinID:
XP_045788356
LinkDB
All DBs
Position
LG5:complement(47684692..47689188)
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AA seq
262 aa
AA seq
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MDQLSAISEDLAEIDGRVADNFRALSNGFQKLEKIKDSSRQSRQLEDLTEKMREAKGLIK
DFDKEVKALEDRFDSKTTKFLNEKKQSMIKELNSYVALKKQYASNIENKRIELFEGPSEG
YTEENVLLASSMTNEQLMDQGNRMMDDTDQAIERGKRIVQDTINVGTETAAALKAQTEQM
SRVVNELDSIHFSIKKASKLVKEIGRQVATDKCIMTLLFLIVIGVIAIIIVKLVHPENKD
IRDIPGLAPPVMNNRRLLWNHS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttgtcggcgatcagcgaggatctggcggagatcgacggacgcgtcgccgac
aatttccgcgctctatcaaatggatttcagaagctggagaagattaaggattcgagtaga
cagagccggcaattggaagatctcacggagaaaatgcgagaggctaaagggcttattaaa
gatttcgataaagaagtcaaagccttggaggatcgttttgacagtaaaactaccaaattt
ttgaatgagaaaaagcagtcaatgatcaaagagttgaattcatatgttgctttgaagaaa
caatatgcttcaaatattgagaataagcgaattgaactctttgagggacccagtgaaggt
tacacagaagaaaatgtcttgctagcttcctcaatgacaaatgaacagctaatggatcaa
gggaatcggatgatggatgacacagatcaagccattgaaagggggaaaaggattgttcaa
gacacaataaatgttggtactgagactgcagcagctcttaaggctcagacggaacaaatg
agcagagttgtcaatgagctagattctatccatttctctataaagaaagcatctaaactg
gtcaaggaaatcggtaggcaggttgctactgacaagtgtattatgacattacttttcctt
atcgtcattggagtaattgctatcattattgtgaagcttgtgcatccagaaaacaaggac
attcgcgacattccaggattagctcctccggtcatgaacaatagaagattgctttggaat
cacagttga
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