Trifolium pratense (red clover): 123883721
Help
Entry
123883721 CDS
T08949
Name
(RefSeq) phospholipase D zeta 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00564
Glycerophospholipid metabolism
tpra00565
Ether lipid metabolism
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
tpra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
123883721
00565 Ether lipid metabolism
123883721
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123883721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123883721
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
123883721
Membrane trafficking [BR:
tpra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
123883721
Endosome - Golgi transport
Others
Others
123883721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
123883721
NCBI-ProteinID:
XP_045788573
LinkDB
All DBs
Position
LG5:37886283..37906322
Genome browser
AA seq
1118 aa
AA seq
DB search
MATEKLMAAGGPKYVQMRSSPPSSPPPATADFASLPSFRYSSGEVYRIFDELPKANIVSV
SRPDASDISPMQLSYTIQVQYKHFKWELEKRAHQVFILHFALKKRAFIEEIHEKQEQVKE
WLQNLGIGEHTTMEQVDEEGDDETVPLQTDESAKNRDVPSSAALPIIRPALGRQHSIADR
AKSAMQGYLNHFLGNISIVNSPEVCKFLEVSMLSFSPEYGPKLKEESVMVKHLPKIKKDD
DSRKCCFSDCFNCCNDNWQKVWAVLKPGFLALLAHPFDTQPLDIIVFDVLPASDANGDGR
LSLAIEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRY
GSYAPPRGLIEDDSQAQWFVDGQAAFEVIASAIEDAKSEIFICGWWLCPELYLRRPFQAH
ASSRLDNLLEAKAKEGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFST
GVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDAPEHKVGDVPPLMWPGKDYYNPRESEPN
SWEDTMKDELVREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPHEQQIPLL
MPQHHMVIPHYLGSNETPSEIQDNVNDKAFKREDSFSSCCQDQDIPLLLPQEPVGLDIPP
GLPKPNGQNSSQHNHDKPRRISTGLPFSFRRAKVAAVGPDTPMKGFVDDLDSEHYHEKMP
HDRVSHVDSQNTDLEWWDTQERDDQGGFADESGQIGPRASCRCQVIRSVSQWSAGTSQTE
ESIHHAYCSLIEKAEYFIYIENQFFISGLSGDDMIRNRVSEALYRRIMRAYNEKKSFRVI
IVIPLLPGFQGGIDDGGAASVRAIMHWQYRTICRGVHSILHNLHELLGSRVHDYISFYGL
RNYGRLSDGGPVATSQVYVHSKIMIIDDCISLIGSANINDRSLLGSRDSEIGVVIEDKEL
TDSYMDGKPWKAGKFSLTLRLALWSEHLGLPAGEVNQIMDPIVDSTYKDIWMTIAKTNTA
IYQDVFSCVPNDLIHTRLAFRQNMALWKEKIGHTTIDLGIAPDKLESYQDGDIKNTNPME
RLASIKGHLVSFPLEFMSQESLRPTFSEGEYYATQVFH
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaaaagttaatggccgccggtggccctaaatacgttcaaatgagatcgtct
ccgccttcgtctcctcctccggcaactgctgattttgcatcacttccgtcttttcgttac
agtagcggcgaagtctatcggattttcgatgaattgcctaaagctaatatcgtttccgtt
tctcgtcctgatgccagtgatattagccctatgcaactctcttatacaattcaggttcaa
tataaacatttcaagtgggagctagagaagagagcgcaccaagtatttattttgcatttt
gcgttaaagaagcgtgcctttattgaggaaatccatgagaagcaagagcaggttaaagaa
tggcttcaaaatctaggaattggcgaacacactactatggagcaagttgacgaagaaggt
gacgatgaaacagttcctttacaaactgatgaaagtgctaaaaacagagacgttccatct
agtgctgctctaccaattatacggccagctttaggacgacaacattctattgcagacagg
gcaaaaagtgcaatgcaagggtatctgaatcactttttgggaaatattagtattgttaac
tctcccgaggtttgcaagtttttggaggtgtcaatgttatctttttcaccggaatatggc
cctaagctgaaggaagaatctgtgatggtgaagcatctgcctaagatcaaaaaagatgat
gactccagaaaatgttgtttctctgactgttttaattgttgtaatgacaattggcaaaag
gtgtgggccgtattgaaacctggattcttggcattgctggcacatccttttgatacacaa
cccttggacattattgtttttgatgtactgcccgcctcagatgctaatggagatggtcgt
ttatcattagcgattgaaatgaaggaacggaatcctttacgccattcattcaaggtgact
tgtggaatccgaagtattagaattagagttaaaagtagtagtaaagttaaagattgggtc
gctgcaattaatgatgctggactcaggcctcccgaaggctggtgtcatcctcaccgctat
ggttcttatgctcctccaagaggcttaattgaagatgacagccaagcccagtggtttgta
gatgggcaagcagcatttgaagtcattgcttctgcaattgaggatgccaaatctgagata
tttatctgtgggtggtggctgtgcccagaactgtatctacggcgacctttccaggctcat
gcttcatcaaggcttgataatctgttggaagcaaaagctaaggaaggggttcagatttac
attcttctctacaaagaggtggctcttgctttgaaaatcaacagtgtttatagcaagaaa
aagcttcttagcattcatgagaatgtgagggtattacgctatcctgaccacttttctact
ggtgtttacctgtggtcacaccatgaaaaacttgtcattgttgataatcatatttgcttc
atcggaggactggatttatgctttggtcgatatgacgcacctgagcataaagtcggagat
gtccctccgctaatgtggcctggaaaggactattacaacccaagagaatctgaaccaaat
tcatgggaagatacaatgaaagatgaattggttcgtgaaaaatatcctcgtatgccttgg
catgatgttcattgtgccctttggggaccaccttgtcgtgacattgctaggcactttgtt
cagcgatggaattatgccaagaggaacaaagctccacatgaacaacaaataccattactt
atgcctcaacatcatatggttattccccattacttgggaagcaatgagacaccaagtgaa
attcaggacaatgtcaatgataaagccttcaagagagaagattcattttcctcatgttgc
caagaccaagatattcctctactcctgcctcaggaaccggttgggttggatattcctcca
ggactcccaaaaccaaatgggcaaaactcctctcaacataaccatgacaagccaagaagg
ataagcactggccttcctttctcattccgaagggccaaagtagcagcagttggtccggat
acaccaatgaagggctttgtagatgatcttgactctgagcattatcacgagaaaatgcct
catgatagagtgtctcatgttgattcacaaaatacagatctggaatggtgggatactcaa
gagcgggatgatcagggaggttttgctgatgaatctggacaaattggtcctcgtgcttcg
tgtcgttgtcaggttattagaagcgtcagtcagtggtccgccggaacaagtcaaactgaa
gagagcatccaccatgcttattgctctctcattgagaaagctgaatacttcatctacatc
gagaaccagttttttatctcgggtctttctggagatgatatgatacgtaatcgtgtgtca
gaagctttatatcggcggattatgcgagcttataatgaaaaaaaatcttttagggttata
atcgtcataccgctcctgcctggcttccagggggggattgatgatgggggtgcagcatct
gtgagagccataatgcattggcagtatcgaaccatttgcagaggggtgcattctatctta
cataatcttcatgagcttcttggttcaagagtacatgactacatctctttttatggtcta
aggaattatggtagactctctgatggtggtcctgtggcaaccagccaggtatacgttcat
agtaaaatcatgattattgatgattgtattagtttgattggatctgctaatattaatgat
agaagcttactcggctccagggactctgagattggtgtagttatagaagacaaagagttg
actgattcttatatggatggaaagccttggaaggcagggaagttttctttgactcttcga
ttagcattatggtctgaacacttgggtctcccggcaggagaggtcaatcaaataatggac
ccaattgttgattctacatacaaggatatttggatgacaatagcaaagacaaatacagca
atttatcaggatgtcttttcctgtgtacctaatgatctgatacacaccagacttgctttc
agacaaaacatggctttgtggaaagaaaaaattggacacactaccatcgatttaggaata
gccccggataaactagagtcctatcaggatggagatatcaagaacactaatcccatggag
agattagcatcaatcaagggtcatcttgtttcttttcccttggagttcatgagtcaagaa
agtctaagacctacttttagtgaaggtgaatactatgccactcaagttttccattga
DBGET
integrated database retrieval system
