KEGG   Trifolium pratense (red clover): 123883968
Entry
123883968         CDS       T08949                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123883968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123883968
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123883968
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     123883968
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 123883968
NCBI-ProteinID: XP_045788890
LinkDB
Position
LG5:20914160..20920812
AA seq 128 aa
MSWASPDELLLSTSLATYLDKKLLVLLRDGRKLLGFLRSFDQFANVVLEGACERVIVGDL
YCDVPLGLYVIRGENVVLIGELDLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcttcccctgatgagcttttactctccacctctcttgctacataccttgac
aaaaaacttcttgtcttgttgcgagatggtcgaaaacttttaggtttcttacgctcgttt
gatcaatttgctaatgttgttctagaaggtgcatgtgaacgagtaattgttggagatctt
tactgtgatgtgcctttaggcctttatgtaattcgtggggaaaatgttgtcttaattgga
gagctggacttgggaaaggaggaacttccgccacatatgacatgtgtgtcagaggctgac
ataagaaaggcacaaaaagcagaacgtgatgctagtgatctaaagggcaccatgaggaaa
aggatggaattccttgattttgactaa

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