Trifolium pratense (red clover): 123884141
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Entry
123884141 CDS
T08949
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 6
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123884141
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123884141
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123884141
Peptidases and inhibitors [BR:
tpra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123884141
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123884141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
123884141
NCBI-ProteinID:
XP_045789118
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All DBs
Position
LG5:complement(45973703..45984382)
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AA seq
478 aa
AA seq
DB search
MITVSVKWQKELFKDVEIDTSQPPYVFKCQLFDLTGVPPERQKIMVKGGLLKDDADWEKL
GVKAGQKLMMMGTADEIVKSPEKGTVFVEDLPEEEQVAAVGHTAGLFNLGNTCYMNSTLQ
CLHSVPELKSALIDYSHSGRNNDVDQSSHLLTVATRELFSELDKSVKPVAPMQFWMVLRK
KYPQFGQLHNGVFMQQDAEECWTQILYTLSQSLRSSGSSENTDAVKGLFGIELNSRIYCQ
ESNEESSETESVYSLKCHISQEVNHLHEGLKHGLKSELEKASAVLGRSAIYLKESRINAL
PRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDELKKKLEAPRQFLRNEEGK
KLGLKVNEKSSVPKENDVKMSDAEGSSNGEPSVAPMEEGEKETQMTGVYDLVAVLTHKGR
SADSGHYVGWVKQENGKWIEFDDDNPKPRLQDDITRLSGGGDWHMAYIIMYKARVVSL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgattacagtgagtgttaagtggcaaaaggaacttttcaaagatgtagaaattgatact
agccagcccccttatgtttttaagtgccaattgtttgatctgactggtgtgcctcctgaa
agacaaaagattatggtcaagggcggtcttttaaaggatgatgctgattgggaaaagtta
ggagtgaaagcgggtcaaaagctaatgatgatgggaacagctgatgaaattgtgaagtct
ccggagaagggaactgtttttgttgaagatcttcctgaagaagaacaagtagctgctgtt
ggacatactgctggtcttttcaatttgggaaatacctgctatatgaactcaacattgcaa
tgcctccattctgtaccagaattgaagtcggctttgattgattactcacattcaggacgg
aacaatgatgttgatcagtcttctcatttgctgactgttgcaacccgtgaattattcagt
gagcttgataaaagtgttaagcctgtggcacctatgcaattttggatggtattgcggaaa
aagtatcctcaatttggccagctacataatggagtgttcatgcaacaggatgctgaagaa
tgttggacacaaattctatacacactttcacaatctctaagatcctctggatctagtgaa
aatactgatgctgtgaagggtctttttggcatagaacttaatagcaggatttattgccaa
gagagtaatgaagaaagctcagaaacagaatctgtttattcacttaaatgccacatatcg
caggaagtaaaccatttgcatgaaggactaaaacatggtttaaaatcagagttggaaaag
gcttctgctgttttgggtcgtagtgctatctacctgaaggaatcacgcatcaatgccctg
ccaaggtacttgactgttcagtttgtccgtttcttttggaagagggaatcaaaccaaaag
gctaagattttgcgaaaagtagattatcctctggagttggatgtttatgatctttgttct
gatgagcttaaaaagaaattggaagctcctagacagttcctaagaaatgaggaaggtaaa
aagcttggtctgaaagtcaatgagaaaagctctgttcccaaggaaaatgatgtaaaaatg
tctgatgctgagggatcgtcaaatggagagccatctgttgctccaatggaggaaggtgaa
aaagaaacacaaatgactggagtttatgatttggtggctgtattgacccacaagggcagg
agtgctgattcaggacattatgttggttgggtcaagcaagaaaatgggaaatggatagag
tttgatgatgacaacccgaaacctagactacaagacgacatcactagactatctggagga
ggtgattggcatatggcatatataatcatgtacaaggctcgtgttgtatctctgtaa
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