Trifolium pratense (red clover): 123884180
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Entry
123884180 CDS
T08949
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123884180
Spliceosome [BR:
tpra03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123884180
Other components
Complex C specific factors
123884180
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Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
CYRIA-B_Rac1-bd
G-patch_2
Motif
Other DBs
NCBI-GeneID:
123884180
NCBI-ProteinID:
XP_045789168
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Position
LG5:53534601..53538145
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AA seq
780 aa
AA seq
DB search
MENDDEFYRRKPREKRREYEDDDEYSGRKRRKYSDLSKKQDFIIFVPALNSMNVDDNLKE
KDKNFGCDKSDENDNCDDDDFLPTEFGKKIKEGAMRREKERLEAQKQKAAGLGQGVSLDF
GAFENHTKAIGSKLLAKMGYKFGGGLGTNQQGILNPIESMKPDILNGSDESKKTTTPLPT
LQTEKKNAPVGDVQPTDASLWLKQWKKKKKKKEEEYVTAEDLLASKQEEDSEVVQKIYDM
RGPQVRVYTNLSDLNAEEKAKEEFVPMPELQHNVALLVRLAEADIQKIDSDLRKERDIAL
SLKKEKENLEAEASFQKNQLDNYEKIMNVLDRVGEENTIGTLTLDSLAQCSSDMHKRYPE
DYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLKLVSQWKELLQGDDCFDIWNTSSP
YTHLVSEVVLPAVRISGINTWHARDPEPMLRFLESWEKLLPSSVLATILDTIVMPKLSSA
VGTWEPHHETIPIHTWVHPWLPMLGHKLEGIYQTIRFKLSTVLDAWHPSDGSAYAILSPW
KTVFDSDSWQQLMHRYIVPKLKAVFVSDDFQVNPASQKLDQFYWVMNWASVIPVHLMVDT
MDIFFTKWLTVLYRWLCSNPNFNEVLRWFLGWKELIPKELLANELIRCKLNCGLVMMNQA
AEGMEVVQPGLKEKISYYTRVSEQRKFETHQKAEAYISADGANEMSMKEIIEAYARDHGL
LFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEERWSLETLGRLLELHNRSLSKRR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgatgatgaattctaccgtcgaaagccaagagagaaacgaagagagtatgaa
gatgatgacgagtattcaggtagaaagcgaagaaaatacagtgatttatcgaagaaacag
gacttcataattttcgttcctgctctaaattcgatgaatgttgatgataatttgaaagaa
aaagataagaattttggttgcgataaatctgatgagaatgataattgtgatgatgatgat
tttttgcctactgagtttgggaagaagattaaggagggagcaatgaggagggagaaggag
agattggaggcgcagaagcagaaggctgctggtctaggtcagggggtatctctggatttt
ggggcttttgagaatcatacaaaagcaattggaagtaagctgctggcgaagatgggttat
aaatttggtggtggtcttgggacgaatcagcagggtatattgaatcctattgagtctatg
aaacctgatattttgaatggatctgatgaatcgaagaagactacaacgccgttgcctact
ttgcagacggaaaagaagaatgcaccggtaggagatgtgcagcctacagatgcaagtttg
tggttaaagcagtggaagaagaagaagaagaaaaaagaagaagagtatgtaactgctgaa
gatttgttggcaagcaaacaagaagaagattcagaggttgttcagaaaatttatgatatg
cggggcccacaggtacgcgtgtatacaaatttgtctgatttgaatgctgaggagaaagca
aaggaagagtttgtcccaatgcctgagcttcagcataacgtagcactattagttcggttg
gctgaggctgacatccaaaagatagatagtgatttgaggaaagagagggatatagcactt
agcttgaaaaaagaaaaagagaacttggaagctgaggcatcatttcaaaagaatcagctg
gataattatgagaaaataatgaatgtgctggaccgagttggagaagagaacaccatagga
acattaacactggactcccttgctcaatgctctagtgacatgcacaaaagatatcctgag
gactataagttgtgtaacttgtcatgcattgcttgttcatatgctctacctttgtttatc
agagtgttccaaggatgggatcctcttcgaaatccttctcatggtttgaagttggtatca
cagtggaaggaattgcttcaaggtgatgattgttttgatatttggaacacgtcgtcacct
tatactcacttggtttcagaggttgtattaccagctgttagaatatctggtatcaatacc
tggcatgcaagggatcctgagccgatgctaaggtttttggagtcatgggaaaaattactt
ccttcttcagttcttgctactatattagacaccatagtcatgccaaaactatcaagtgca
gttggtacttgggaaccacatcatgagaccattcctatccacacatgggtgcatccatgg
ctacccatgctagggcacaaattggagggtatctaccagacgattcgtttcaaattgagt
actgttcttgatgcgtggcatccgagtgatggttctgcatatgccatattgtccccttgg
aagactgtatttgattctgatagttggcaacaacttatgcaccgttatattgtaccaaag
ctgaaggctgtatttgtatcggatgactttcaagtgaacccggcaagtcagaaacttgat
cagttttattgggtaatgaactgggcttcagttatcccagttcatctgatggttgacacg
atggatatcttctttaccaagtggcttacagttttgtatcgttggttgtgctcaaatcct
aactttaatgaagttttgagatggtttttgggctggaaagaacttattccaaaagaactt
ttggcaaatgaacttattcgatgcaagctcaattgcggtcttgttatgatgaaccaggct
gctgaaggcatggaggttgtgcaacctggtttgaaggagaagataagctattataccagg
gtaagtgagcagaggaaatttgagactcatcaaaaagcagaagcctatatcagtgcagat
ggtgcgaatgaaatgagcatgaaagaaatcattgaagcctatgctcgggatcatggttta
ctgttcaaacttaaacctggtagaatgcataatggccatcaaatatatgggtttggcaat
gtcagcataataattgattctctaaatcaaaaggtctatgcccaaaatgaggagagatgg
tctttagaaactcttgggcgattgctagagttacataatagatctcttagtaaaagacgc
tga
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