Trifolium pratense (red clover): 123884199
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Entry
123884199 CDS
T08949
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123884199
Spliceosome [BR:
tpra03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123884199
Other components
Complex C specific factors
123884199
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
123884199
NCBI-ProteinID:
XP_045789200
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Position
LG5:complement(55935147..55941548)
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AA seq
862 aa
AA seq
DB search
MDEDQEMEKFGMENDFEGGEWVGGEFYYRKRREKRHQTKEDVLYGVFADSEDDDDDEYSS
RKRRKDRDFSKKQDFTKPVNFVSSGNFMPNQDNVNENLKEKDENDSYVDEDRPGLGAGLG
FGSASTSGSGLGFNSGPVNGSHRNDESDDNDNGDDKFLPTAFGKKIKEGAMRREKERLEK
KKGQKQKPGLGLGGSVDVGTFETHTKGIGMKLLAKMGYKGGGLGKNQQGILNPIEATLRA
KNKGLGFDSSEKTTMPLPTLQTEKKNTSGGDVQPTVGRSRERSWLKQLKKKKKEEYVTAE
ELLASKQEEDSEVVQKIYDMRGPQVRVYTNLSDLNAEEKAKEEDVPMPELQHNVALIVRL
AEADIQEIDSDLRKERDIALSLKKEKENLEAEASFQKNQLDNYEKIMSVLDRVGEDNTLG
TLTLDSLAQCFRDMHKRYPDDYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVS
QWKALLQGDDCFDIWDTSSPYTHLVSEVVLSAVRISGINTWPARDPEPMLRFLESWEKLL
PSSVLADILDNIVMPKLSNAVGTWEPHLETIPIHTWVHPWLPLLGHKLEEIYRTIRFKLS
TVLDAWHPSDGSAYAILSPWKTVFDKDSWQQLMHRFIVPKLKAVFVSDEFQVNPASQKLD
QFYWVMNWASAIPAHLMVDTMEIFFTKWLTVLYRWLCSNPNFEEVTKWYLGWKELIPKEL
LANETIRYKINCGLEMLNQAVEGMEVVQPGLKEKISYIRVSEQRKFENQQKAAASAQPVN
ADGVNEMSMKEIIETYAREHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEE
TWSLETLARLLELHNRSLSKRR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatcaagagatggagaaattcggaatggagaatgatttcgaaggtggcgaa
tgggttggtggtgaattctactatcgaaagcgtagagagaaacgacatcaaaccaaagag
gatgttctctatggagtttttgctgattctgaagatgacgatgatgatgagtattctagt
aggaagcgaagaaaagaccgtgatttttcgaagaaacaggacttcactaaaccggtgaat
ttcgtttccagtggaaattttatgcctaatcaagataatgttaatgagaatttgaaagaa
aaagatgagaatgatagttatgttgacgaagataggcctggtttaggtgcaggtcttggt
tttggatctgctagcacgtccgggtctggtttaggttttaattctggtcctgtgaatggt
tctcataggaatgatgaatctgatgataatgataacggtgatgataagtttttgcctact
gcgtttgggaagaagattaaggagggagcaatgaggagggagaaggagagattggagaag
aagaaggggcagaagcagaagcctggtctaggtctggggggatctgtggatgttgggact
ttcgagactcatacaaaaggaattggaatgaagctgctggcgaagatgggttataaaggt
ggtggtcttgggaagaatcagcagggtattttgaatcctattgaggcaacattaagggct
aagaataaaggtcttggatttgattcatcagagaagactacaatgccgttgcccactttg
cagacggaaaagaagaatacatcgggaggagatgtgcagcctacagttggaagatcgaga
gaacgttcgtggttaaagcagttgaagaagaagaaaaaagaagagtatgtaactgctgaa
gagttgttggcgagcaagcaagaagaagattcagaggttgttcagaagatttatgatatg
cggggcccgcaggtacgagtgtatacaaatttgtctgatttgaatgctgaggagaaagca
aaggaagaggatgtcccaatgcccgagcttcagcataacgtagcactaatagttcggttg
gctgaggctgacatccaagagatagatagtgatttgaggaaagagagggatatagcactt
agcttgaaaaaagaaaaagagaacttggaagctgaggcatcatttcaaaagaatcagctg
gataattatgagaaaataatgagtgtgctagaccgagttggagaagacaacaccttagga
acattaacattggactcccttgctcaatgctttagagacatgcacaaaagatatcctgac
gactataagttgtgtaacttgtcatgcattgcttgttcatatgctcttcctttgtttatc
agagtgttccaaggatgggatcctcttcgaaatccttctcatggtttggagttggtatca
cagtggaaggcattgcttcaaggtgatgattgttttgatatttgggacacatcgtcacct
tatactcacttggtttcagaggttgtattatcagctgttagaatatctggtataaataca
tggcctgcacgggatcctgagccgatgctaaggtttttggagtcatgggaaaagttgctt
ccttcttcagttctcgctgatatattagacaacatagtcatgccaaaactatcaaatgca
gtaggtacttgggaaccacatcttgagaccattcctatccacacatgggtgcatccatgg
ctacctttgctagggcacaaattggaggagatctaccggacgattcgtttcaaattgagt
actgttcttgatgcgtggcatccaagtgatggttctgcatatgccatattgtccccttgg
aagactgtatttgataaggatagttggcaacaacttatgcaccgttttattgtaccaaag
ctgaaggctgtatttgtatctgatgaatttcaagtgaacccggcaagtcagaaacttgat
cagttttattgggtaatgaactgggcttcagctatcccagctcatctgatggttgacacg
atggaaatcttctttaccaagtggcttacagttttgtatcgttggttgtgctcaaatcct
aactttgaagaagttacgaaatggtatttgggctggaaagaacttattccaaaagaactt
ttggcaaatgaaactattcgatacaagatcaattgcggtcttgaaatgttgaaccaggct
gttgaaggtatggaggttgtgcaacctggtttgaaggagaagataagctatatcagggta
agtgagcagaggaaatttgagaatcagcagaaagcagcggcctctgctcagcctgtcaat
gcagatggtgtgaatgaaatgagcatgaaagaaatcattgaaacctatgctcgggagcat
ggtttactgttcaaacttaaacctggtagaatgcataatggccatcaaatatatgggttt
ggcaatgtcagcataataattgattctctaaatcaaaaggtctatgcccaaaatgaggag
acatggtctttagaaactcttgcgcgattgctagagttacataatagatctcttagtaaa
agacgctga
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