Trifolium pratense (red clover): 123884255
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Entry
123884255 CDS
T08949
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123884255
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123884255
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Pol_alpha_B_N
Crescentin
DNA_repr_REX1B
Big_5
Motif
Other DBs
NCBI-GeneID:
123884255
NCBI-ProteinID:
XP_045789278
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All DBs
Position
LG5:6065838..6085831
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AA seq
537 aa
AA seq
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MGNNAFDGQELSEKLRKLNNSQQSIESVSRLCVSHRKRAKDIVETWNKLFSSSHKDQRVP
FLNLANDILQNSRRKGNEFVNEFWKVLPSALKRVYASDEPGKKAVIRLIDIWETRKVFGS
RAQGLKDEIMSKSSLPSSASNGRNSNPIKISKRDGHSLRLKLAIGCLPEKILSALHSVNE
EHPNEEAALNKCNAAVCQVGKLVEDVESTLSQGNQPGSTLVDDLQQQEKELKQYTVQLEN
GEAARATLLSQLKEALQEQESRQELVHSQLLVARDQIERVASIRTRFSQATEATRVPEQN
IPSVQPNSTPPVQNTVEDMKATVAAVAARLAASTSSAFMLSTALSSLVAEEAASMNGSLN
SSEFNSAPPGFHLEKRPKLEQKMPVSDIKSSDIKSSSFFAPLQQPSATNMPLPTPTMVSI
SQTNQLQGAFSSAFPPPPHTQMNPPANQYVQSAGMMVGGIPYGYGSNNNLQPPPPPPLPP
HVAMGLTRPNAQSSQSPQSQAQQVQQQQQSSTGGFYRPPGFYGPTHPSTSPAPAPRQ
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaatgcgtttgatggacaagaattgtcggagaagttgcggaagctcaacaac
tcacaacaaagcattgaatcggtatcccgattgtgtgtttctcaccggaagagagcaaaa
gatatagttgaaacatggaataaattgttcagttcttcccataaagatcagcgcgtccct
tttctgaacttggctaatgacatcttgcaaaatagtaggcggaaaggaaatgagttcgtt
aatgaattctggaaagttcttccatcagctctcaagcgtgtttatgcaagtgatgagccg
ggaaagaaagcagtaatcagacttattgacatatgggaaaccagaaaggtttttggttcg
cgggctcagggtctcaaggatgaaataatgagcaagagttcgcttccatcatctgcaagc
aatggaaggaattcaaatcctatcaagatatctaagagggacggccactcattgagatta
aaactagctattggatgtttgccagaaaaaatactatcagcattgcattctgtgaatgaa
gaacatcctaatgaggaagctgccttgaacaagtgtaatgctgctgtttgtcaagtgggt
aaacttgtagaagatgttgaaagtacattgtctcaaggaaatcagccgggatccacattg
gttgatgatttgcaacagcaagaaaaggagcttaaacaatatacggtgcaacttgaaaat
ggtgaggctgccagggctactttgctttcccagcttaaagaagcactgcaggaacaggaa
tcaaggcaagaacttgttcactctcaattgctagttgcaagagatcagattgagcgggta
gccagtatccggacgaggtttagccaagcaacagaagccacaagggtgccggaacaaaat
attccatctgttcaaccaaacagcacccctcctgtacaaaataccgtggaagatatgaaa
gcaacagtagctgctgttgctgctaggcttgctgcctctacatcctcagctttcatgctt
tcaactgctctttcttcccttgttgctgaagaagctgcctccatgaatggtagcttgaac
tcttctgaatttaattcggctccacctggtttccatctagagaaaagacccaaacttgaa
cagaaaatgcctgtttctgatatcaaaagttctgatatcaagagctcttcttttttcgcc
cctttacaacaaccttctgcaacaaatatgccattgccaacaccgaccatggtatccata
tcacaaaccaatcaattacaaggtgcattttcttcagccttccctccccctccacataca
cagatgaatcctccggctaatcaatatgttcaatctgctggaatgatggttgggggaatt
ccttatggatatggatcgaacaacaacctacaacctccacccccacctcctttgccccca
catgtggcaatggggttaactaggccaaatgctcagtcatcacaatcacctcaatcacaa
gcccagcaagtgcagcagcaacaacagtcgtcaactggaggattttacaggccacctggg
ttttatgggccaacccatccatcaacatcaccagcaccggcacctaggcagtaa
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