Trifolium pratense (red clover): 123884428
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Entry
123884428 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123884428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123884428
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123884428
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
HECT type E3
123884428
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
123884428
NCBI-ProteinID:
XP_045789476
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All DBs
Position
LG5:23739719..23763556
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AA seq
1023 aa
AA seq
DB search
MFFSGDPSNRKRVDLGGRSTKERDRKNLLEQTRLERNRRLWLRQQNSAALRIQKCFRAKK
VVRTEHSKLRQKFLKIYGTNCLNVDRKAFGPDSDFLRQFLYFFNVENHDDFLVLVQICRL
ILQFVQESGDAVRLFAGEDYSSICAFVNCRLKKLAYNCIRAVHHNRNQLKDQLLLTPKES
NASAIPLLEVLLLLIDLKLPWSCKIVGYLSQNNGFGLLREIILTGKDNAEKCIESSLEHV
LTGVMCHIGQNPCICSDIDPRYSFSSQILTIPFLWHVFPNLRQVFARKGMGQHYIHQMAT
FVPNLINFLPKDISDEFPTYACLLGNILETGGVSLSQPDCSFDMAIDLAAVTTFLLEAHP
SLTRSDTRQNSVIAEDDTTGDEVMEVALDRKLDQQICSSIDTRFLLQLTNILFRDISSAN
GPDDMEVAAVGAVCGFLYVIFNTLPLERIMTVLAYRTDLVPMLWNFMKRCHENKKWSTLS
ERLSYLSGDAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLKDISSLIILLKQALW
QLLWVNHTSSANSVRSNAVRTSSKKLSIDGIQQRVSIVVSELLSQLQDWNNRRQFTSPSD
FHADGVNDFFISQAVIENARANEILKQAAFLIPFTSRVKIFTSQLAAARQRQGSQAVFTR
NRFRIRRDHILEDAYNQMSQLSEDDLRGLIRVTFVNEFGVEEAGIDGGGIFKDFMENITR
ASFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGTLLAKAMFEGILVDLPFATFF
LSKLKQKHNYLNDLPSLDPELYRHLIFLKRFEGDISELELYFVILNNEYGEQTEEDLLPG
GKNLRVTNENVITFIHLVANHRLNSQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLLIS
GSLDSLDVDDLRQHTNYAGTYHSEHNVIEMFWEVLKGFSMENQKKFLKFVTGCSRGPLLG
FRYLEPLFCIQRAGGNASEDALDRLPTSATCMNLLKLPPYRSKDQLESKLLYAINADAGF
DLS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcagtggcgatccttctaatcgtaaacgcgtcgatttaggtggtcgcagtacg
aaggaaagagatagaaagaatcttcttgaacagactcgattggaaaggaatcgacggttg
tggttgcgtcagcagaactctgctgcacttcggattcagaaatgcttcagagcgaaaaaa
gttgtcagaacggaacactctaagttgcgacagaaattccttaaaatctatgggacgaac
tgccttaatgttgacaggaaagcttttggtccagattctgatttcctccgccagttcctc
tatttctttaatgtggaaaaccatgatgattttttagttcttgtgcaaatttgccgattg
attctacagtttgttcaagaaagtggggatgctgtgagactttttgctggtgaagattac
tcatccatatgtgcttttgtgaactgccgactgaagaagcttgcatataattgtattcgt
gcagtacatcataacagaaatcagttaaaggatcaacttttattgactccgaaggagtct
aatgcatcagctattcctttattggaagttttattactgttgatagacctcaaactgcca
tggagctgtaagatagtaggatatctctctcaaaacaatggattcggcctacttagagag
attattctgacaggaaaggataatgcagaaaaatgtattgaatcgtctttggagcatgtg
cttacaggtgtaatgtgtcacattggtcagaatccatgtatctgttcagacattgatcca
agatatagcttctcatcgcagatccttacaattcctttcttatggcatgtttttccaaac
ttaagacaggtttttgcaagaaagggaatgggccagcattacattcatcaaatggcgacg
tttgtgccaaatctgatcaattttctacctaaggatatatcagatgaatttcctacctat
gcctgtcttcttggaaatatattagaaactggcggggtttctttgtctcaacccgactgt
tcattcgatatggccatagaccttgcagctgttactacatttttactggaggcacacccc
tctctgacaagatctgatactagacaaaattctgtgatcgctgaggatgatacgactggc
gatgaagtcatggaagtagctctggatagaaaattagatcaacaaatttgtagttccata
gatactcgcttccttctccaactgacaaatatattatttagagatatttcatctgcaaat
gggccagatgatatggaggttgcagctgttggtgcagtttgtgggtttttatatgttatc
ttcaacacattgccacttgaaaggattatgactgtgctcgcctacagaactgaccttgtt
cctatgctttggaattttatgaagcggtgccatgagaacaaaaaatggtcaactttgtct
gagcggttatcatacctctcaggggatgcccctggttggctgttacctcttgctgtattc
tgtcctgtctacaagcatatgcttatgatagttgataatgaggaattttatgagcaggag
aaacccctatcactgaaggatatcagcagcctcatcattctattgaagcaggctctgtgg
cagctactgtgggtaaatcatacctcatctgctaattcagttaggtctaatgcagttagg
acaagcagtaaaaagctttcaattgatggcattcaacagagggttagcatagttgtctct
gagctcctgtcccagctccaagattggaacaatagacgacagtttacatcccccagtgat
ttccatgctgatggggtgaatgacttttttatctcccaggctgttatagaaaatgcacga
gcaaatgaaattttaaagcaggctgctttcttgataccatttacaagcagggttaaaatt
ttcacttctcaactagctgcagctaggcaaagacaaggatctcaagctgtatttactaga
aaccggttcagaataagacgtgatcatattttggaagatgcttataatcaaatgagtcag
ttgtcagaagatgatcttcgaggactgattcgtgtgacttttgtcaatgaatttggagtt
gaagaagctggaatagatggaggtggaatattcaaagatttcatggagaacatcacacgg
gcttcctttgatgtgcagtatggattatttaaggaaacagcggatcatctgctttatcca
aatcctggatctggaatgatacatgaacaacatctccaatttttccactttcttggtact
cttcttgcaaaggctatgttcgaagggattcttgttgatttaccatttgctacattcttt
ttgagcaaattgaaacagaagcacaactatttgaatgacctgccttccttggaccctgaa
ttatatcgccatcttatctttctaaagcgttttgagggtgacatttcggagttagaacta
tactttgttatattaaataatgaatatggagagcaaacagaagaggatctgcttccaggg
ggaaagaacctgcgtgtcacaaatgagaatgtcattacttttatccatcttgtagccaat
catcgcttgaattctcagatacgtcaacaaagttctcatttcttgagaggatttcagcaa
cttattcagaaggattggattgatatgtttaatgagcatgaacttcagcttctgatatca
ggatcacttgatagcttggatgttgatgatttgcggcagcatacgaattatgcaggaacc
tatcatagtgagcacaatgtgattgagatgttctgggaagtactcaaaggattttcaatg
gaaaaccagaagaaattcttaaagtttgtgacaggttgctccagaggaccgttgcttgga
ttccgttatcttgagcctttgttctgcatacaaagggctggtggtaatgcttctgaggat
gctctggacagattaccaacatcggctacctgtatgaatctgttaaagcttccaccatat
agaagtaaggatcaactggaatccaaactattgtatgccataaatgctgatgctggcttt
gatttgagttaa
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