Trifolium pratense (red clover): 123884730
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Entry
123884730 CDS
T08949
Name
(RefSeq) ATPase family AAA domain-containing protein FIGL1-like
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123884730
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123884730
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
123884730
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123884730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
FIGL1_N
Vps4_C
AAA_lid_3
AAA_5
AAA_22
RuvB_N
TIP49
AAA_16
Mg_chelatase
AAA_14
ABC_tran
IstB_IS21
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
123884730
NCBI-ProteinID:
XP_045789858
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All DBs
Position
LG5:complement(43882292..43888587)
Genome browser
AA seq
663 aa
AA seq
DB search
MEKESMKKCWRKEVDENLQRLHSLLFGVERALDQQNCDFSTGYILSLRLIGFIDSRSQSE
IDQAFLQQTRRQALTYLHTAKQSLTPLIDRQAFEQVKRSPGPIFRSTGDIDIDKIRNSKY
FQALLKPSKEKDCNQLVDQLGKQNNTGKEASKEVVQTKLTSIYGKNSLRTSNGSKSFFNL
KNNNSEDCIIIGRPQSHGIHTKSPGVSSVFEVEGEGRARGNTFPTKRAHVENTSPRVGYV
KSPSINEEVNPDVAGNGFVTARAKLEMDVKQKQGAIGSPSAPVSPQCDNNPANRLYGGRS
YGVSRRGIRGNFVPPIKSNGSNTGNMTSRIAGNKSGDSLDESTKKCLEMLYGPDGELPEK
LRNLEPRLIEHVSNEIMDKDPNVHWDDIAGLGHAKRCVSEMVILPLQRPDLFMGCRSPGR
GLLLFGPPGTGKTMVGKAIAGEAKATFFYISSSSLTSKWIGEGEKLVRALFGVASCRQPA
VIFVDEIDSLLSQRKSDGEHEASRRLKTQFLIEMEGFDGGNDQILLIGATNRPQELDEAA
RRRLTKRLYIPLPSSEARAWIARSLLEKDGLFNLSNEEMDVICNLTDGYSGSDMKNLVKD
ASMGPLREKIRQGVNIVELKKEDMRPVTLQDFKDSLHEVRPSVSPDELGTYEQWNKKFGS
MSV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaatctatgaaaaagtgttggagaaaagaagtagatgaaaatcttcaaaga
ttacactctctcttgttcggcgttgaacgtgccctagatcaacagaattgcgatttctct
accggttatattctctctcttcgtctcatcggtttcattgattctcgctctcaatcagaa
atcgatcaagcttttcttcaacagactcgtcgtcaagctttaacctatcttcatactgct
aaacaatctctcactcccctcattgatcgccaagcttttgagcaagtaaagaggtctcca
ggacccatttttaggtcaacaggagatattgacattgacaagatacggaattctaaatac
tttcaagctcttcttaagccatctaaagaaaaagattgcaatcaattggttgatcaactg
gggaagcaaaacaatacaggcaaagaagcatcaaaggaagtggtgcaaacaaagttaaca
tcaatatatgggaaaaacagcttgaggactagtaatggttccaaaagtttttttaacttg
aaaaataacaattctgaggactgtataattattggaaggcctcaatcacatggcatccat
acaaagagtcctggtgtctcttctgtttttgaagtcgaaggagaaggaagagctcgtgga
aacacgtttccgacaaaacgtgcacacgtggaaaatactagccccagagttggttatgtc
aagtcaccttcaatcaatgaggaagttaatcctgatgttgctggcaatgggtttgttact
gccagagcaaagttggaaatggatgtaaagcaaaagcagggtgcaattggttcacccagt
gcacctgtctcaccacaatgcgacaacaatcctgccaacaggctatatggtgggagatca
tatggtgtttcacgacgtggcatccgtggtaattttgtcccccctattaaatccaacggg
agcaatactggaaatatgacttcccgaattgctggcaacaaaagtggtgattctttagat
gagtctacaaagaaatgtttggaaatgctgtatggtcctgatggtgaacttcctgagaaa
ctaagaaatttagaacctcgcctcattgaacatgttagtaacgagattatggataaagat
cccaatgtccactgggatgacattgctggattgggccatgccaaacgttgtgtcagtgag
atggtcatattacctctgcaacgtcctgacttatttatgggctgccgttctcctgggaga
ggtttgcttctatttggtccaccaggaactggtaaaacaatggtaggaaaagccatagct
ggggaggcaaaggcaaccttcttttacatatcttcaagctcgttgactagcaaatggatt
ggtgaaggtgaaaagctagtaagagccctctttggagtggccagttgtcgtcagccagca
gtaatttttgttgatgaaatagattcgctcttatctcagcgtaagtcagatggtgagcat
gaagcaagcagaaggctaaagacacagtttcttattgaaatggaaggtttcgacggtggt
aacgaccaaattcttcttataggtgcaacaaatcgtcctcaagagcttgatgaagcagca
cggaggagacttaccaaaagactttatattcccctaccatcctcagaggcaagagcttgg
attgcacgtagccttttagagaaggacggattattcaacctatcaaatgaggaaatggat
gttatatgcaacttaacagatggttattctggatcagacatgaaaaacttagtgaaggat
gcttctatgggtcccctgagagagaaaataagacaaggtgtaaatattgtagagttgaag
aaggaggatatgaggccagtaactcttcaggacttcaaagattccctacatgaggtgaga
ccttctgtttcacctgatgaacttggcacttatgagcaatggaacaagaaatttggaagc
atgtcagtttag
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