Trifolium pratense (red clover): 123884732
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Entry
123884732 CDS
T08949
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123884732
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123884732
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123884732
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
123884732
NCBI-ProteinID:
XP_045789861
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Position
LG5:complement(7598061..7605371)
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AA seq
724 aa
AA seq
DB search
MKEKRVSNIYMLDELESRFPSSSDAEAKTRRFSFDKLSHDGVHVSSKTSSRSFKRGIRKG
SEGLKSIGRSLGFGVSKAVFPEDLQVSENKILDPQDNFLLFWNKLFVISCILAVSVDPLF
FYLPVINDSLRCLGIDRNLAIIVTTLRTFIDAFYLIHMALQFRTAYIAPSSRVFGRGELV
IDPTQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQSSKGSDVVTTKQALLFIILLQYIPR
FLRILPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERNDFCWKKAC
SDNGYNKKFLYCGNQYMQGYSSWQNKSEAILTSQCSTDNDNPPFDYGIFTQALKSGIVSS
NKFLSKYCYCLWWGLQNLSTLGQGLQTSTYTGEVIFSITLAIAGLILFALLIGNMQTYLQ
SLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEECLVQSLPKDL
QRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIR
GRLESVTTDGGRSGFFNRSFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALMEVEAF
ALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKTTELRRKE
EPEDSEGTRSNVGGSSYSLGATLLASRFAANALRGVHRNRIVKSSRDLVKLQKPSEPDFT
SDDM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaagagagttagtaatatttatatgttggatgaattggaatctagatttccc
tcatcttctgacgctgaagctaaaacacgtcgatttagttttgataaattaagccatgat
ggtgtccatgttagcagtaagacctcctcaaggtctttcaaaagaggaataagaaaagga
tctgaaggactcaagtcaattggccgatcacttggatttggggtatctaaggctgtgttc
ccagaagatcttcaagtttcagaaaacaagatacttgatcctcaagacaattttttgctc
ttttggaataagctttttgttatctcatgcattttggccgtgtctgtggatccgctgttt
ttttatctccctgtcatcaatgattcgttacgctgtcttggtatagaccgaaacttggca
attatagttaccacattgaggacatttatcgatgctttctatcttatacacatggctctc
caattccgtactgcatatattgctccatcatctcgtgtttttggacggggtgagcttgtc
atagatccgacacagatagcaaagcgatacctacagcgatatttcatcattgatttctta
tcagtgttgcccttaccacagattgtggtgtggagatttcttcagagttcaaaaggttca
gatgtagtcacaacaaagcaggccttacttttcattattttgcttcagtacattccaaga
tttctccgtatattaccattgacttctgaacttaagagaacagccggtgtctttgctgaa
actgcttgggctggcgctgcatattatttgctattgttcatgcttgccagccatatagtc
gggtcgttttggtacttgttagctgttgaacgcaatgacttttgctggaagaaagcttgt
agtgacaatggatacaacaagaaattcttgtattgtggcaaccaatacatgcaaggttat
agttcctggcagaataaaagtgaagctattcttacatcacagtgctctacagataatgat
aatcctccttttgactatgggatattcacacaagccttgaaatctggcattgtttcatct
aacaagttcttgtccaagtactgttactgtttatggtgggggcttcagaatttgagtaca
cttggccaggggcttcaaactagtacttacaccggggaggttatcttttcaataacatta
gccatagctggccttatcctctttgcacttctgattggtaacatgcagacatatcttcag
tctcttaccattaggcttgaggaaatgagagtcaagagacgtgattcagaacagtggatg
catcatcgtctgctcccacaagagcttagagagcgtgtgagacgatatgatcaatataag
tggttggcgacacgtggtgtagatgaagaatgtttggtacaaagtctcccaaaggacctt
caaagagacattaagcgtcacctttgtctggcattagttagaagggttcctttatttgag
agtatggatgagagattgcttgatgctatatgcgagagactgaagccatgtttatttaca
gagaatacttacattgttagggaaggagatccggttgatgagatgctcttcatcatacgt
ggtcgtctcgagagtgttactacagatggtgggaggagtggcttttttaatcgcagtttt
ctaaaagaggcagacttctgcggggaggagcttttaacctgggcgcttgatcccaaatct
ggctctaacctcccatcttctactcgaacagttaaggctttaatggaggttgaggctttt
gcgttaactgctgaagagttgaaatttgttgccagtcagtttaggcgccttcacagtaga
caggttcaacacaccttccgcttttactcccaacaatggaggacttgggctgcatgcttt
attcaagcagcatggcgtaggtattgcaaacgaaaaactacggagcttcgtcgaaaggaa
gaacccgaggactcagaaggaactcgcagcaatgttggtggcagttcatacagtcttggt
gcgacattattagcttcaagatttgctgcaaatgctcttcgtggtgtacatcgcaatcgg
attgtgaagagttccagggacttggtcaaactacagaaaccttctgagcccgacttcact
tctgatgatatgtaa
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