Trifolium pratense (red clover): 123884940
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Entry
123884940 CDS
T08949
Name
(RefSeq) putative ABC transporter B family member 8 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123884940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123884940
04147 Exosome [BR:
tpra04147
]
123884940
04090 CD molecules [BR:
tpra04090
]
123884940
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123884940
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123884940
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123884940
CD molecules [BR:
tpra04090
]
Proteins
123884940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
Zeta_toxin
AAA_29
AAA_16
RsgA_GTPase
AAA_15
ABC_ATPase
AAA_30
PRK
APEH_N
Motif
Other DBs
NCBI-GeneID:
123884940
NCBI-ProteinID:
XP_045790121
LinkDB
All DBs
Position
LG5:complement(1908472..1920125)
Genome browser
AA seq
1238 aa
AA seq
DB search
MDSKKEEGVRKVKEGGSIGIILRYSDWIDVVLMLMGALGAIGDGMSTNVLLLFASRIMNS
LGGSNNNNSETSMSEVEKCSLYFVYLGLAAMVVAFMEGYCWSKTSERQVLRIRYKYLEAV
LRQEVGFFDSQETNTSEIINSISKDTNLIQEVLSEKVPLFLMQSSSFISGICFATYFSWR
LALVAFPTLVLLIIPGMIYGKYLIYLSKSSMKEYGKANAIVQQALSSIKTVYSFTAEKRI
MEKYSEILDKTSKLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGRIYAA
GICFIMSGLSLGVVLPDLKYFTEVSIAASRIFAMIDRTPEIDSEDTTKGIILETISGKLN
FEHVKFTYPSRQESVVLYDFNLQIEAGKTVALVGASGSGKSTAIALVQRFYDANEGVVKV
DGFDIKSLQLKWIRGKMGLVSQEHAMFGTSIKENIMFGKNDATMDEIVAAATAANAHNFI
RQLPDGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNAL
DQASMGRTTLVVAHKLSTIRNADLIAVMSNGCIIETGTHNELINIPNGHYAKLAKLQTQL
SINDDQDQNQEQQNILLSAARSSAGRTSTARSSPAVMFPKSPLPNDIITSQVSHPSPSFS
RLLVLNSPEWKQGLIGTLSAIAFGSIQPIYALTIGGMISAFFATSHQEMKHRIMNYSLIF
TSLSLASIILNLLQHYNFAYMGAKLTKRIRLCMLEKILTFETAWFDEEKNSSGALCSRLS
NEASMVKSLVADRVCLLVQTTSAVTIAMIIGLVVAWKLALVMIAVQPLTILCFYTRKVLL
STLSTKFVKAQNQSTQIAVEAVYNHRIVTSFGSIEKVLRLFDKAQEAPRMEARKKSWLAG
IGMGSAQCLTFMCWALDFWYGGRLVEKREISSGDVFKTFFVLVSTGKVIAEAGSMTSDLA
KSSTAVASVFEILDRQSLIPKDGEETNGIMLEKLSGKIELKNVDFSYPSRAKTPILNKFC
LEVKPGKSVGLVGKSGCGKSTVIALIQRFYDVERGSVKIDNVDLRELDIHWYRQQTALVS
QEPVIYSGSIRDNILFGKQDANENEIVEAARSANAHDFISSLKDGYETECGERGVQLSGG
QKQRIAIARAIIRNPIILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKE
LDSIAYVLEGKVVEQGSYSQLKHKRGAFFNLANHQIQT
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggactctaaaaaagaggaaggggtgagaaaagtaaaagagggaggttcaataggcata
attttgagatatagtgattggattgatgttgttttaatgttgatgggtgctttgggagca
attggagatggaatgtcaacaaatgttttgcttctctttgctagccgtattatgaacagc
ttaggtggaagtaataataacaatagtgagacttccatgtctgaggttgaaaaatgcagc
ttatattttgtctacttgggattggcagcaatggtggtggctttcatggaagggtattgt
tggagcaaaacaagtgagaggcaggtattgagaattcgctacaagtatttggaagctgtt
cttagacaagaagttgggttttttgattcacaagaaacaaatacttctgaaatcattaat
agcatatcaaaggacactaatcttatacaagaagttctaagtgaaaaggtgcctttattt
ttgatgcaatcatcatcattcatctcagggatttgttttgctacatacttctcatggaga
ttagcattagtagcatttccaactcttgttttactcataatccctggcatgatatatgga
aaatacctaatctatttatcaaaatcatcaatgaaagagtatggaaaagcaaatgcaatt
gttcaacaagcattaagctcaataaaaacggtttattcattcactgctgagaagagaata
atggaaaaatattcagaaatattagataaaacttcaaagcttggaattaaacaaggtata
gctaaaggtttagctgttggaagcactggtttgtcttttgcaatttgggcttttcttgct
tggtatggaagtcatttggttatgtataaaggtgaaagtggtggaagaatctatgctgct
ggaatttgcttcataatgagtggattatccttgggagtagtacttccagatttgaaatac
ttcacagaagtatcaattgctgcatcaagaatatttgctatgattgatagaacaccagaa
attgatagtgaagacacaacaaaaggaattatattagaaaccataagtggcaaattaaac
tttgagcatgtaaaattcacatacccttctagacaagaaagtgttgtactatatgatttt
aatcttcaaattgaagctggaaaaactgttgcattagttggtgcaagtggaagtggtaaa
tcaacagcaatagcattagtacaaagattttatgatgcaaatgaaggtgttgttaaggtt
gatggttttgatataaaaagtttacaattgaaatggattagagggaaaatgggacttgtg
agtcaagaacatgctatgtttggtacatctattaaggaaaatattatgtttggtaaaaat
gatgctactatggatgaaattgttgctgctgctactgctgctaatgctcataatttcatt
aggcaacttcctgatggatatgaaaccaagattggtgaaagaggagcacttctttcagga
ggacaaaagcaacgaatagccattgcaagagctatcataaaaaatcctgtaattctctta
cttgatgaagcaactagtgcacttgactctgaatctgaattattagtccaaaatgccctt
gatcaagcctcaatgggaaggactactttggttgttgctcacaagctatcaacaatcaga
aatgcagacctcatagcagttatgagtaatggttgcatcattgaaactggcacacacaat
gaactaatcaacattccaaatggtcactatgcaaaattagcaaaattacaaacacaatta
agcattaatgatgaccaagatcaaaatcaagaacaacaaaacattcttctttctgctgca
agaagtagtgcaggtagaacaagcactgctagatcaagccctgccgtaatgtttccgaaa
tcaccattacctaatgatataatcacttctcaagtttctcatccatcaccttcattttca
aggctacttgttctgaattctcctgaatggaaacaaggactaatcggaacactctcagct
attgcatttggttcaattcaaccgatttatgcattaacaatcggtggcatgatttcagct
tttttcgctacaagtcatcaagaaatgaaacacaggatcatgaactattcgttgattttc
acttctctatcgctcgcttctattatactcaatctcttgcaacactacaattttgcttat
atgggagcaaagttaacaaaaaggataagattgtgtatgttggagaaaatcttaaccttc
gaaaccgcttggtttgatgaggaaaagaattctagtggtgcattgtgttcgaggttgagt
aacgaagcatcgatggtgaagtcactcgttgctgatagagtctgtttacttgttcaaacc
acttcggctgtgacaatcgcgatgatcataggtcttgtagtagcttggaagctagctctt
gttatgatagcggtccaaccacttacaatactttgtttttatacgcgaaaggttttgctt
tctacgctttcaactaaattcgttaaggcgcagaaccaaagcacacagattgctgtcgag
gctgtttataatcacagaattgtgacctcgtttggaagcatcgaaaaagttctcagactg
tttgacaaggcgcaagaggcaccgaggatggaagctaggaagaaatcttggctagctggt
attggtatgggatctgctcagtgtttaacttttatgtgctgggctttggatttttggtat
ggtggtagattggtggaaaagagagaaatttcttcgggcgatgtgtttaaaacatttttt
gtgttggttagtaccggaaaagttatcgctgaagctggtagcatgacttctgatctagct
aaaagctcaacagcagttgcatcagtgtttgaaattcttgatagacaatcacttattccc
aaggatggagaagaaaccaatggaattatgttggaaaagctaagtggaaaaatagaacta
aagaatgttgatttttcttatccaagtagagcaaagacacctattttgaacaaattttgc
ttggaagtaaagccaggaaaaagtgttggactagttggaaaaagtggatgtggaaaatca
acagtgattgcattaatacaaagattctatgatgttgaaagaggatcagtgaaaattgat
aatgtggatttaagagaattagatattcattggtatagacaacaaactgcattagtaagt
caagaacctgttatatattctggtagcatcagggataacattttgtttggaaaacaagat
gcaaatgaaaatgaaattgttgaagctgctaggtctgcaaatgctcatgatttcatatca
tcattgaaagatggatatgaaactgaatgtggagaaagaggagttcaattatcaggagga
caaaaacaaagaatagcaattgcaagagccataatcagaaatccaataatacttctacta
gatgaagcaacaagtgctttggatgttcaatcagaacaagttgttcaagaagcacttgat
aggattatggttggaagaactactattgttgtggcacatagacttaacacaatcaaagaa
cttgactcaattgcttatgtcttagagggtaaggttgtggaacaaggaagctattctcag
cttaagcacaagagaggtgcttttttcaatcttgccaaccatcaaatccaaacttag
DBGET
integrated database retrieval system
