Trifolium pratense (red clover): 123885029
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Entry
123885029 CDS
T08949
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123885029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123885029
04147 Exosome [BR:
tpra04147
]
123885029
04090 CD molecules [BR:
tpra04090
]
123885029
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123885029
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123885029
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123885029
CD molecules [BR:
tpra04090
]
Proteins
123885029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
Zeta_toxin
AAA_5
AAA_30
AAA_33
RhodobacterPufX
Motif
Other DBs
NCBI-GeneID:
123885029
NCBI-ProteinID:
XP_045790207
LinkDB
All DBs
Position
LG5:41728858..41736047
Genome browser
AA seq
1496 aa
AA seq
DB search
MADSSFEIDNPRRHYPTPVSYQSVSGSSSFIHSSRSKVTPRTRRTRRNKIPSTPFASDDD
RSWQGEVSWKFEPTGLREHSTNFGSVLSPWPTNSTSDRSHVFRQSANDYYLSRIGGFRGL
TNPSNDHSSYGRVELRSHVARAHNDHSYFDQYSGFSKLGIIKEGVSSGSRNINHKTSPLA
EEDELSAIDYSITDEHVMSPYGNDNHFLDELSYVKHDHKVPSYGNKSPSQIYGGGGYSHY
ESKMASGFDDEGDEDMDEDDDDVVGPPKTVGLFSLFRYTRKWDWLLVFFGCLGALINGGS
LPFYSYLFGNLVNKLSREAKDNKSQLMNDVDQICVFMTGLAAVVVVGAYMEITCWRLVGE
RSAQRIRTEYLRAILRQDITFFDTEINTGDIMHGIASDVAQIQEVMGEKMAHFIHHIFTF
ICGYAVGFRRSWKVSLVVFSVTPLTMFCGMAYKALYGGLAAKEEASYRKAGSIAEQAISS
IRTVFSFVAESQLVEKYSDLLQKSAPVGAKLGFAKGAGMGVIYLVTYSTWALAFWYGSIL
IAKGELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFYVIERIPEIDPYNP
EGRKLSSVRGRIELKNVSFAYPSRPDSLILNSINLVFPSSKTLALVGASGGGKSTIFALI
ERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATSILENVMMGKDDATKEEA
ISACIAADAHNFISKLPLRYDTQAGDRGTKLSGGQKQRIALARAMIKNPKILILDEPTSA
LDAESESAVQRAIDKISAGRTTIVIAHRIATVKNADAIVVLEHGSVAEIGDHRQLMAKTG
AYYNLVKLATESISKPLPLETGMQKTNDLSSINNKYAPDIAKSSYLVDIDSMQDEEQEDI
EDKKYKKPKNYKLSEIWKLQKPEFMMLISGLVLGMFAGAVLSLFPLVLGISLGVYFGNDT
SKMKRDVGYLCLVLVGLGFGCIVSMTGQQGLCGWAGSKLTLRVRNLLFQSILRQELGWFD
FDENSTGVLVSLLSRDSVSFRSVLGDRFSVLLMGLSSAAVGLGVSFAFNVKLTLVAAAVT
PLTLGASYINLIINIGPKINNDSYARASNIASGAVSNIRTVATFSAQDQIVKSFDNALSE
PRKKSLKSSQLQGLVFGLFQGAMYAAYTLTLWFGAYLVKKNQGEFEDVYKIFLILVLSSF
SVGQLAGLAPDTSMASTSIPAVQDVINRKPLIGNDGRKTRKVDRSKAFKIEFKMVTFAYP
SRPEITVLRNFCLKVKGGSTVALVGPSGSGKSTVVWLTQRFYDPDQGNVMMSGVDLREID
VKWLRRQIGLVGQEPALFAGSIRENIAFGDQSASWAEIEAAAMEAYIHKFISGLPQGYET
QVGESGVQLSGGQKQRIAIARAILKKSKVLLLDEASSALDLESEKHIQEALKNVSKEATT
IIVAHRLSTIREADKIAVMRNGEVVEYGSHDTLISSNQNGLYASLVRAETEANAFA
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcttcgtttgagatagacaatccgagaagacactatccaactccagtgagt
tatcagagtgtatccggctctagttccttcatacattcttctcgaagcaaagtaactccg
agaactagaagaactcgtcgcaacaaaattccatccacaccctttgcctcagacgacgac
cgttcatggcaaggagaagtttcgtggaagtttgaaccaactgggttgcgcgaacatagt
acaaacttcggttctgttcttagtccatggccaaccaactccacctctgatcgtagccat
gtgtttcgccaatcagctaatgactattacctttcgagaattggtggttttcgaggcctt
acaaacccatcaaatgatcattcttcctatggaagagttgaacttaggagccatgttgct
agggcccacaatgatcatagttactttgatcaatatagtggattctctaaattaggaatc
atcaaagaaggagttagtagtggaagtcgtaacattaatcataagactagtccattagcc
gaggaagacgagctcagtgcgatcgattatagtataacagatgaacatgttatgtcacct
tatgggaatgataatcattttcttgatgaattgtcatatgttaaacatgatcataaagta
ccatcttatggtaacaaatcccctagccaaatttatggtggtggtggttatagtcactat
gagagtaaaatggcatcagggtttgatgatgaaggtgatgaggatatggatgaggatgat
gatgatgttgtaggtcctccaaagacagttggattgtttagcttgtttaggtatacaaga
aagtgggattggttgcttgtgttttttggttgtttaggggctcttataaatggaggatca
cttcctttttattcttatctttttggtaacttggttaataagctttcaagagaagcaaaa
gataacaaatctcagctgatgaatgatgtagaccagatatgtgtatttatgaccggctta
gctgcagttgtggtagttggagcatatatggagatcacatgttggaggttagtaggggag
agatctgctcaaagaattagaactgagtatctaagagcaattcttagacaagacataact
ttttttgatacagaaattaatactggtgatattatgcatggtattgctagtgatgttgca
caaattcaagaagttatgggagagaagatggctcacttcattcatcatatatttacattc
atatgtggatatgcagttggatttagaagatcatggaaagtgtcattggttgtattctca
gtcacaccattaacaatgttctgtggtatggcttacaaagcactttatggtggtttagca
gcaaaagaagaagcttcttataggaaagctggaagcattgctgagcaggcaataagttca
attaggacagtattttcatttgttgctgaaagccaattggttgaaaaatattctgatcta
cttcaaaaatcagctccagttggggctaaacttggttttgctaaaggtgcaggaatgggt
gttatctacttagtaacttattcaacatgggctttggctttttggtatggttctatctta
attgctaagggtgaacttgatggtggttcagctattgcttgtttctttggtgtcaatgtt
ggtggaagaggcttggcattagcactttcatattttgcacaatttgcacaaggtactgtt
gcggcaagccgtgtattctatgttatagagagaattcctgagattgatccttacaatcct
gagggtaggaaactttcatctgttcgtggaaggatcgagttaaagaatgttagtttcgca
tatccatctcgtcctgattcactaatacttaattccataaacttggtatttccatcttca
aaaactttggcattggttggtgcaagtggaggtggaaaatcaactatctttgctctcata
gaaaggttttatgaccctatagaagggattattaccttggatggacatgatttaaggaca
cttcaagtgaagtggttaagggatcaaattgggatggttggtcaagagccaattctgttt
gctacatctatacttgaaaatgtgatgatgggaaaagatgatgctacaaaggaagaggca
atttctgcttgtattgctgctgatgctcacaatttcatatctaagctgccactgcgctac
gacactcaggctggtgatagaggtacgaaactttcgggaggtcaaaagcaaagaattgca
ttggctagagcaatgataaaaaatccgaaaatccttattttagatgaaccaactagtgct
cttgatgctgagtcagagtctgcagtccaaagggccattgacaagatttctgcaggcagg
acaactattgtcattgctcacaggatagcaacagtgaagaatgctgatgccattgtagta
cttgaacacggttctgtcgctgagattggtgaccatcgccagcttatggcgaaaaccgga
gcttactacaaccttgtcaagcttgcaactgaatccatttcaaaacctcttccattagaa
accggaatgcaaaaaaccaatgatttgtcgtccattaataataaatatgctcctgatata
gcaaaatcaagttatctagtcgatatcgattcaatgcaggatgaggaacaagaagatatt
gaagataaaaaatataaaaagccaaaaaattataaactttctgagatatggaaattgcaa
aagccggagtttatgatgctaatttcaggccttgttttgggcatgtttgctggtgctgtt
ctgtccctttttccattagttttaggaatatcccttggagtatattttggcaatgacact
tcaaaaatgaaaagagatgtagggtacctttgtttagtacttgtcggccttggattcggt
tgcatcgtttccatgacaggacaacaaggtttatgtggttgggcaggttcaaagctaaca
cttcgggttagaaacctcttgtttcaatccatattgagacaagaacttggatggtttgat
tttgatgaaaactccaccggtgtattggtgtcactgctctcgagagattcagttagtttt
cgttcggtactcggtgacagattctcagtacttcttatgggattgagttcggccgctgtt
ggactcggcgtgtcctttgcctttaatgtcaaactaactcttgttgcagctgctgtaaca
cctttaacccttggtgcaagttacataaacttgatcataaacattggtccgaaaatcaat
aacgattcttatgcaagagctagcaatattgcttctggtgcagtttcaaatataaggaca
gttgctacattttctgctcaggatcagattgttaaatcctttgataatgccttatcagaa
cctagaaaaaaatcattaaaaagttcacagcttcaaggtcttgtatttggattgttccaa
ggtgctatgtatgcagcatacaccttaactctttggtttggtgcataccttgtaaaaaag
aaccaaggagaatttgaagatgtttataagatttttctcattcttgttttgagttcattt
tctgttggtcaactagctggtttagcacctgatacttctatggcttcaacatcaattcct
gcagttcaagatgtgataaacagaaagccattgataggaaatgatggaagaaaaactagg
aaagttgatagatcaaaggcttttaaaatagaattcaaaatggtgacatttgcatatcca
tcaaggcctgagataactgtgctgaggaatttctgtttgaaggttaaaggtggaagtacc
gtggctttggtaggaccaagtggatcaggaaaatcaacagttgtgtggttgacacagaga
ttctatgatcctgatcaaggaaatgttatgatgagtggtgtagatttgagggagattgat
gtgaaatggttgaggagacaaattggtttagttggtcaagaacctgcactttttgctggg
agcataagggaaaatattgcatttggagaccaaagtgcttcttgggctgaaattgaagct
gctgcaatggaagcttacatccacaagttcattagtggacttcctcagggttatgaaact
caggttggtgaaagtggagtccaattatcaggtggacaaaaacaaaggatagctatagca
agggccatattgaagaaatcaaaggtgcttctacttgatgaagcaagcagtgcattggac
ttagaatcagaaaaacacatacaagaagctcttaagaatgtttccaaagaagcaacaact
ataatagttgcgcatcgtctttctacaataagagaagctgataaaattgcagttatgaga
aatggagaagtagttgagtatggtagccatgacactcttatttcttcaaatcaaaatggt
ttgtatgctagtcttgttagagctgagaccgaagccaatgcatttgcttga
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integrated database retrieval system
