Trifolium pratense (red clover): 123885239
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Entry
123885239 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123885239
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123885239
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
123885239
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
TMEM154
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
123885239
NCBI-ProteinID:
XP_045790467
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All DBs
Position
LG5:56494828..56496164
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AA seq
318 aa
AA seq
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MDTNTVTVTVTPPSPSSLQNISPSILIIVIVLAVTVIVSFAICFLLRHLNCNCLRRRIAA
DPTSTTTTTESSHHNNQISPEIISPSVIDSLPLFTYSSISRRSSAVTAADCAVCLSKFRN
SDLLRSLPLCCHAFHSDCIDTWLRSNLSCPLCRSSVFPSDSDLAKILRSNSSESFRVEIG
NVSRRGTNSTNPELAGGGDSRSYSIGSFDYHVVEPSEVSFTQDHRRSVSDQKEIHIPISD
DSSVVTIAGEVSGSGHWLKDYVDRLSATISSRTASFRSSGRFFGGGGSSRRIEPVDYDVE
GGRIGEEISEMFRWLSGV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaatacagttacagttacagttacaccaccgtcaccgtcatcgttacaaaac
ataagccccagcattctcatcattgtaatcgttctcgccgtcaccgtcatcgtttcattc
gcaatctgttttcttctacgtcacctcaactgtaactgcctccgccgtcgtatcgccgcc
gatccaacatcaacaacaacaacaaccgaatcatcacatcacaacaaccaaatctcgccg
gagataatatctccttccgttatcgattcacttcctctgtttacatactcttccatttct
cgccgctcctccgccgtcaccgccgctgactgcgccgtttgtctctcgaagttccgtaac
agtgacctcctccgttctcttccactatgttgccatgcatttcactctgattgtattgac
acgtggcttcgttcaaatctctcatgtcctctatgtcgttcctctgtttttccttccgat
tccgacctcgcgaaaattctccgatcaaattcctcggagagtttccgagttgaaatcgga
aacgtgagccggcgagggactaattcaactaatccagaactcgccggtggcggtgactcg
aggtcgtattctattggatcgtttgattatcatgtggttgagccatcggaagtttcattc
acacaagatcaccggagaagtgtttccgatcagaaggaaattcacattccgatttcagat
gattcttctgtagttactattgccggtgaagtttctggcagtggacattggttgaaggat
tacgtggacaggctttcggctactatttcatcgcgaacggcgtcgtttcgaagctctgga
aggtttttcggtggtggcggaagtagtcggagaattgagccggttgattatgatgtggaa
ggtggtagaattggtgaagagattagtgaaatgtttcgttggctttcaggggtatga
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