Trifolium pratense (red clover): 123885259
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Entry
123885259 CDS
T08949
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
KO
K03255
protein TIF31
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tpra03012
]
123885259
Translation factors [BR:
tpra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123885259
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_8
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
123885259
NCBI-ProteinID:
XP_045790489
LinkDB
All DBs
Position
LG5:complement(7797071..7819664)
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AA seq
1782 aa
AA seq
DB search
MAPKTGKTKPHKTKGEKKKKEEKVLPTVIEITVEIPDGSQVTLKGISTDRILDLRKLLAV
HVETCHLTNFSLSHEVRGERLKDNVEIVSLKPCHVSIVQEDYYTEEVVVTHIRRLLDIAA
CTSAFGKLPSGRGSVENGSPKPKANDQNLDLGGDVSMYPPPRLGQFYDFFSFSNLTPPFH
YIRRSNRPFLEDKTDDDFFQIDVRVCSGKPTTIVACRKGFYPAGKRPLISHALVPLLQQI
SRVFDSAYKALMKAFTEHNKFGNLPYGFRANTWVVPPVVSDNPGVFPTLPMEDETWGGNG
GGQGRDSKHEKRQWARDFAILAAMPCQNAEERQIRDRKAFLLHSLFVDVSVFKAVSAIKH
FKDSKQSSISNVPSSYEERIGDLTIKVIRDLSDASIKLDCKNDGTLVLGLTEEELAQRNL
LKGITADESAAVHDTPTLGAVIIRHCGYTAVVKVSPETDSAGSPNGSLVIDIEDQPEGGA
NALNVNSLRMLLHKASTPQSSNAIQRVQSTDVDNSHSARSFVKQVLEESFLKLKEEDTRR
SKSIRWELGACWVQHLQSQATAKTEPKKAEEAKLEPSVKGLGKQGGLLKELKKKIDIRNS
KVEQGNDIDINKPDATQQEFERQCEEKETIWRKLLTDAAYSRLKESKTDFHLKSPDELME
MAHKYYDDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMSSLGRVVDLADKLPHVQS
LCIHEMVVRAYKHILQAVVAAVDNDSELASSIASCLNILLGTPSFETNDADITSCDILKW
KWVEIFLLKRFGWKWKYEISKDLRKFAILRGLCHKVGLELVPRDYDMDTASPFRKSDIVS
MVPIYKHVACSSADGRTLLESSKTSLDKGKLEDSVNYGTKALSKLVSVCGPYHRMTAGAY
SLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALK
YVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNKRLLGADHI
QTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSDDLRTQDAAAWLEYFESKALE
QQEAARNGTPKPDASISSKGHLSVSDLLDYITPDADLKAREAQKKARAKLKEKPGQNSDT
ATDESHKEEDVSIDYSITETSSDKENKSEAQFQEQKIDKVEFTNLDQTMLNEGNKLAESD
NSDEGWQEAVPKGRSVIGRKSSSSRRPTLAKLNTNFINVSQSSKYRGNPSNFSSPRSNLN
ETTAGTSLPVPKKFVKSTSFSPKLNGSNTPTAGVEKLADTKSAPSSPAPSDQIAKPAPVN
GGITLQSTSKLFSYKEVALAPPGTIVKAVAEQPPKGNPNVEQNSEVSPIVIAEKEIHSNV
GAPNDIEEKVQNSVNENAQESFHGEEKEKEVVVVAANTATLKSIEVRKLQEANNDVVIEK
NVEVGNITAVVVEKSDSLNKATNATSKDSSEIEAQSTSLTVSVESKIHDNDASISKEVDI
EGEKQEVIEGGKEQTKKLSAAAPPFNPSTIPVFGSVPIPVPVPGFNDHVGILPPPVNISP
LLPRRSLHQSATARVPYGPRISGGYNRHYGNRVPRTKIIFPSGEQSSDGNPNSPPTIMNP
HASEFVPGQIWVTPNGYITSPNGIPVSPNSFPPISPNDGSPHDSLNDIPVNQTEFATSPN
SSNDLAQVENNLQNEKVLDEQVTKALTAQVSSEKQPVEQNPQPDPHVSTENGCPELEEKD
IVLSDPTEVEVANKDTVDEVESSKCWGDYSDNEAESTEVKES
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagaccggaaaaacaaaaccgcacaaaactaaaggagaaaaaaagaaaaaa
gaagagaaagttttaccgacggttattgaaattacggttgaaataccagatggttcacaa
gttaccctcaagggcatctctacagacaggatactggatttgagaaagctcttagcagtc
catgttgagacttgtcacttgactaacttctccctatctcacgaggtgcgaggcgaaagg
ctgaaagataacgtggaaatcgtatcactcaaaccatgtcatgtctcaatcgttcaagag
gactactacacggaagaggttgtggtgacgcatattcgccgacttttagacatcgcagcc
tgcacctcagccttcgggaaactaccctccgggcgagggtcagtcgaaaatggatcccca
aaacccaaagccaatgatcagaatttggacttgggtggtgatgtctccatgtatccacca
cctagacttggacaattctatgacttcttttccttttcaaaccttacacccccatttcat
tacatacgaagatcaaaccgtccattccttgaggataagaccgatgatgatttctttcag
atcgatgttagggtttgcagtggcaaaccaactacaattgttgcctgtaggaaaggattc
tatcctgctggaaaacgtcctcttattagccatgcattggtgcctctcttacagcaaata
agcagggtgtttgattctgcgtataaagctcttatgaaggcatttacagaacacaataag
tttggcaaccttccttacggttttcgtgcaaacacatgggttgtccctccagttgtttct
gacaatccaggtgtgtttcccacactgcctatggaagatgaaacttggggaggaaatgga
ggtggtcaaggaagggatagtaaacatgaaaagagacaatgggccagagattttgcaatc
ctagctgcaatgccctgtcaaaatgcagaagagaggcaaattcgagataggaaagccttt
ctgcttcatagtttattcgtagacgtatcagtcttcaaagcagtttctgcaattaagcat
tttaaagatagcaaacaaagctctattagtaatgttccatcttcatatgaagaaagaatc
ggtgatttaactattaaggtgataagagatttatctgatgcaagcattaagttggactgc
aaaaatgacgggactctggttcttggattaaccgaggaagaacttgctcaaagaaacttg
cttaaaggcataactgctgatgaaagtgcagctgttcatgacactcctactttaggtgca
gtaattatacgacattgtggctacacagctgtggtaaaggtttcacctgagacagattcg
gcggggagtcctaatggttctttggtaattgatattgaggaccaacctgaaggaggtgca
aatgcattaaacgttaacagcttgaggatgctattgcacaaggcatccacacctcaatca
tctaatgcaatccaacgagtccagagcactgatgtcgataattctcattctgctcggtct
ttcgtaaagcaagttctcgaggaaagttttctaaaattgaaggaagaggacactagacgt
agcaaatctatcagatgggagcttggggcatgctgggtacaacatttgcaaagccaagct
acagcaaaaactgagccaaaaaaggccgaagaagctaaacttgaaccatctgtaaagggt
cttggaaaacaaggtgggttactaaaggaattgaagaaaaagattgacatcaggaactct
aaagtagaacaagggaacgacattgacataaacaagcctgatgctactcaacaggaattt
gaaagacaatgtgaagaaaaggaaactatatggagaaaactgcttactgatgctgcatat
tcacgccttaaagaatctaaaactgattttcatctaaagtcacctgatgaattgatggag
atggcacataaatattatgatgatgttgcacttccaaagctggtggcagattttggatcc
cttgaactttcacctgttgatgggagaacattgactgatttcatgcataccaggggcttg
cagatgtcttccttgggacgagtggttgatcttgctgataaacttcctcatgtgcaatca
ctttgtatacatgagatggttgttcgagcctacaagcacatcttgcaagctgttgttgca
gctgttgataatgattctgaattggcttcatctatagcatcatgcttaaatatattgttg
ggaactccgtcatttgaaactaacgatgctgatattactagttgtgatatactgaaatgg
aagtgggtagaaatcttccttttgaagaggtttggatggaagtggaagtatgaaattagt
aaagatttaagaaagtttgccattcttcgtggactgtgccataaggttggacttgagctt
gttccgagggactatgatatggatacagcatctccttttagaaagtcagatattgtaagc
atggtccccatatacaagcatgttgcttgctcatctgctgatggccgaacactgttggaa
tcatcaaagacttccttggataaaggaaaattggaggattctgtcaactacggcaccaag
gcactttcaaagttagtatcagtgtgtgggccttaccatagaatgaccgcaggagcttat
agtctcttggctgttgtgctataccatactggtgatttcaatcaggcaactatctatcag
caaaaagcactagatattaatgagagagagcttggactggaccatcccgataccatgaaa
agttacggggatcttgctgttttctattatcgtctccaacatactgagttggctttaaag
tatgttaatcgtgcattgtatcttctgcacctaacttgtggaccttcacatccgaacact
gctgccacctacatcaatgtagcaatgatggaagaaggattggggaatgtccatgttgcc
ctgagataccttcatgaggctttaaaatgtaacaaaagattacttggagctgatcatata
cagacggcagccagctatcatgcaatagccattgctctttctttgatggaagcatactct
ctaagcgttcagcatgaacaaaccactctccagatattgcaggccaaacttgggtctgat
gatctaaggactcaggatgcagctgcttggcttgaatatttcgagtcaaaggctctcgaa
caacaggaagctgctcgcaatggtacacctaagccagatgcctcaatctccagcaagggt
catttaagcgtgtcagacctcttggattacataacaccagatgctgatttgaaagcaaga
gaagcacaaaaaaaggctcgtgccaagttgaaagaaaaaccaggccaaaattcggataca
gctacagatgaaagtcacaaggaggaagatgtgtctatagattattcaattactgagact
tcaagcgataaagaaaataaatctgaagctcaatttcaagaacaaaagatagataaagtt
gagttcacaaatttagaccaaacaatgctcaatgaaggcaataaactggcagagagtgac
aactcagatgaaggatggcaggaagcagttcctaaaggtcgttcggtcatcgggcgcaag
tcatcttcatcaaggagacctaccctagcaaaactaaacaccaacttcatcaatgtttct
caatcatccaaatatcgaggaaatccctcaaacttttcttctccaagatcaaatttaaat
gagactactgcagggacgtctcttcctgttccaaaaaagtttgtcaagagcacaagcttc
agtcctaagctgaatggctctaacacccctaccgctggagtggagaagttagcagacaca
aagtcagctccatctagcccggctccaagcgatcaaattgctaaaccagctcctgttaat
ggtggcatcactcttcagtcaacaagtaaacttttttcttacaaagaagttgccttagcc
ccacctggaacaattgtcaaggctgtggctgaacagccaccgaaaggaaatcctaatgtt
gaacaaaattctgaggtgagccccatagtaattgcagagaaggagatccatagtaatgta
ggagccccaaatgatattgaagagaaggttcaaaattcagttaatgagaacgcgcaagaa
tctttccatggagaagaaaaagaaaaggaagttgttgtggtggcagctaatacagcaaca
ttaaaaagtatcgaggtcagaaaactccaggaagcaaacaatgatgttgttatagagaag
aatgttgaagtcggaaacatcacagccgtggtggttgagaaatctgatagtttaaacaag
gcaaccaatgctacctccaaagattcatcagagatagaagcacaatcaacttccctaacc
gtttcagttgaaagtaaaatacacgacaacgatgcttctatatcaaaagaggtggatatt
gaaggagaaaagcaagaagtaatagaaggtggaaaagaacaaaccaagaaactttcagca
gctgcaccaccatttaatccatccacaattccagtttttggctctgttccaattccagtt
ccagttccaggtttcaatgatcatgtaggtattttgcctccgccggtaaatatttctcct
ttgcttccacggagatctctgcatcagtcagcgacagctagggttccatatggtccacgg
atttctggtggctataatagacattatgggaaccgcgttccacgaactaaaattatattt
ccgtcaggtgagcagtccagtgatggcaaccctaacagccctcctacaataatgaaccca
catgcctcagagtttgtacctggacaaatttgggtgactcctaatggatatataacttcg
ccaaatggcattccagtatctcctaatagtttccccccaatatctccaaatgatggtagt
cctcatgattcactaaatgatatcccagtgaaccaaactgagtttgcaacatctccaaat
agttcaaatgatttagcacaagttgaaaacaatcttcaaaatgaaaaagttctcgatgag
caagttaccaaagctttgacagcacaagtcagttctgagaagcagccagtggagcaaaat
cctcaacctgacccacatgtcagcactgaaaatggttgtcctgaactagaagaaaaggat
atagtccttagcgacccaactgaggttgaagtagccaacaaagacacggtagatgaggta
gagtcaagcaaatgttggggagattacagtgacaacgaagctgaatcaactgaggttaag
gaaagttaa
DBGET
integrated database retrieval system
