Trifolium pratense (red clover): 123885404
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Entry
123885404 CDS
T08949
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123885404
Spliceosome [BR:
tpra03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123885404
Other components
Complex C specific factors
123885404
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
123885404
NCBI-ProteinID:
XP_045790636
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All DBs
Position
LG5:complement(53770582..53773521)
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AA seq
813 aa
AA seq
DB search
MENDFEGGEWRGGEFYCQKTREKRHRSREDVLYGVFADSEDDDDEYSRRKRRKDRDFSKK
HDFTKPVIFVPALNFMPNQDNVDEDLKEKYENFGCDESDENDNGDDNFLPTEFGKKIKEG
AMRREKERLEEKKKKAGLGQVVSVDFAGFEKHTKKIGSKLLAKMGYKFGGGVGINQQGIV
NPIEVMKPSILNGLNESKKNTTPLPTLQTEKKDAPVGDVQPTVGISRERSGLKQWKKNKK
KEEYVTAEDFLASKQEDSEVVLKIYDMRGPQVRVYTNLSDLNAEEKAKEEDVPMPELQHN
VALIVRLAEADIQEIDSDLRKERDIALSLKKENENLEAEALFQKNQLDKYEKIMNVLDRI
GEENREENTLGTLTLDSLAQCFRDMHKRYPEDYKLCNLSCIACSYALPLFIRVFQGWDPL
RNPSHGLELMSQWKELLQGDDCFDIWDTSSPYTYLVSEVVLPAVRISGINTWHARDPEPM
LRFLESWEKLLPSSVLATILDTIVMPKLSSAVGTWEPRHETIPIHTWVHPWLPLLGHKLE
GIYQMIRFKLSTVLDAWQWHPSDGSVYAILSPWKTVFDSDSWQQLMHRFIVPKLKAVFVS
DDFQVNLASQKLDQLYWVMNWASVIPVHLMVDTMDIFFTKWLTVLYRWLCSNPNFNEVLR
WFLGWKELIPKELLANELIRCKLNCGLVMMNQAAEGMEVVQPGFKEEISYYIRVSEQRKF
ETHQKAAAYISADGANEMSVKEIIEAYARDHGLLFKLKPGRMHNGHQIYGFGNVSIIIDS
LNQKVYAQNEERWSLETLGRLLELHNRSLSKRR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgatttcgaaggtggcgaatggcgtggtggtgaattctactgtcaaaaaaca
agagagaaacgacatcgatccagagaggatgttctctatggagtttttgcggattctgaa
gatgatgatgatgagtattcccgtagaaagcgaagaaaagaccgtgatttttcgaagaaa
catgacttcactaaaccggtgatttttgttcctgctctaaatttcatgcctaatcaagat
aatgttgatgaggatttgaaagaaaaatatgagaattttggttgtgatgaatctgatgag
aatgataatggtgatgataattttttgcctactgagtttgggaagaagattaaggaggga
gcaatgaggagggagaaggagagattggaggagaagaagaagaaagctggtctaggtcag
gtggtatctgtggattttgcgggttttgagaaacatacaaaaaaaattggaagtaagctg
ctggcgaagatgggttataaatttggtggtggtgttgggatcaatcagcagggtatagtg
aatcctattgaggttatgaaaccttctattttgaatggattgaatgaatcgaagaagaat
acaacgccgttgcctactttgcagacggaaaagaaggatgcaccggtaggagatgtgcag
cctacagttggaatatcgagagaacgttcggggttaaagcagtggaagaagaataagaaa
aaagaagagtatgtaactgctgaagatttcttggccagcaagcaagaagattcagaggtt
gttctgaaaatttatgatatgcggggcccgcaggtacgagtgtatacaaatttgtctgat
ttgaatgctgaggagaaagcaaaggaagaggacgtccccatgcctgagcttcagcataac
gtagcactaatagttcggttggctgaggctgacatccaagagatagatagtgatttgagg
aaagagagggatatagcacttagcttgaaaaaagaaaacgagaacttggaagctgaggca
ttgtttcaaaagaatcagttggataagtatgagaaaataatgaatgtgctggaccgaatt
ggagaagagaacagagaagagaacaccttaggaacattaacattggactcgcttgctcaa
tgctttagagacatgcacaaaagatatcctgaggactataagttgtgtaacttgtcatgc
attgcttgttcatatgctctacctttgtttatcagagtgttccaaggatgggatcctctt
cgaaatccttctcatggtttggagttgatgtcacagtggaaggaattgcttcaaggtgat
gattgttttgatatttgggacacttcgtcaccttatacttacttggtttcagaggttgta
ttaccagctgttagaatatctggtatcaatacctggcatgcacgggatcctgagccgatg
ctaaggtttttggagtcatgggaaaaattacttccttcttcagttcttgctactatatta
gacaccatagtcatgccaaaactatcaagtgcagttggtacttgggaaccacgtcatgag
accattcctatccacacatgggtgcatccgtggctacctttgctagggcacaaattggag
ggtatctaccagatgattcgtttcaaattgagtactgttcttgatgcgtggcagtggcat
ccgagtgatggttctgtatatgccatattgtccccttggaagactgtatttgattctgat
agttggcaacaacttatgcaccgttttattgtaccaaagctgaaggctgtatttgtatct
gatgactttcaagtgaacctggcaagtcagaaacttgatcagttatattgggtaatgaac
tgggcttcagttatcccagttcatctgatggttgacacgatggatatcttctttaccaag
tggcttacagttttgtatcgttggttgtgctcaaatcctaactttaatgaagttttgaga
tggtttttgggctggaaagaacttattccaaaagaacttttggcaaatgaacttatccga
tgcaagctcaattgcggtcttgttatgatgaaccaggctgctgaaggcatggaggttgtg
caacctggttttaaggaggagattagctattatatcagggtaagtgagcagaggaaattt
gagactcatcagaaagcagcagcctatatcagtgcagatggtgcgaatgaaatgagcgtg
aaagaaatcattgaagcctatgctcgggatcatggtttactgttcaaacttaaacctggt
agaatgcataatgggcatcaaatatatgggtttggcaatgtcagcataataattgattct
ctaaatcaaaaggtctatgcccaaaatgaggagagatggtctttagaaactcttgggcga
ttgctagagttacataatagatctcttagtaaaagacgctga
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