Trifolium pratense (red clover): 123885456
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Entry
123885456 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123885456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123885456
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123885456
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123885456
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
zf-Di19
PHD_4
Motif
Other DBs
NCBI-GeneID:
123885456
NCBI-ProteinID:
XP_045790699
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All DBs
Position
LG5:complement(27819007..27823351)
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AA seq
308 aa
AA seq
DB search
MESDSTVSSMIMMDEDLHPHQFSSSTSKQHSNSTPTSTSVHELLECPVCTNSMYPPIHQC
HNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLELPCRYTSIGCPEIFPYYSK
LKHESICNFRPYNCPYAGSDCSVLGDISQLVAHLRDDHRVDMHSGCTFNHRYVKSNPMEV
ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDERDARSYSYSLEVGGSGRK
LIYEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQQNPEGG
VCIPNLCS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatagtactgtgtcttctatgatcatgatggatgaagatttgcatccacat
caattttcatcttcaacctctaaacaacatagcaatagtacacctacttctactagtgtt
catgagcttcttgaatgtcctgtttgtacaaattcaatgtaccctccaattcatcagtgt
cacaatggacataccctatgttcaacttgtaagacaagggtgcacaacaggtgcccaact
tgcagacaagaactcggcgatattcggtgtttagcattggagaagatagcagaatcactt
gaacttccttgcagatacacctctattgggtgtccagagatatttccctattacagcaaa
ctcaaacatgaatctatttgtaacttcagaccttacaactgcccttatgctgggtcagac
tgttctgttctcggcgatatttcacagcttgttgcccatttaagggacgaccacagagtt
gatatgcattctggatgcacttttaatcaccgttatgtcaagtcaaatcccatggaagtt
gaaaatgctacatggatgttaacggtcttccactgttttggacaatatttttgtctgcat
ttcgaagcctttcaacttggaatggctccagtttacatggcattcctccgtttcatgggt
gatgaaagagacgccaggagctacagctatagtcttgaggtaggaggaagcggacgcaaa
ctaatctacgagggaagtccaaggagcattagagatagccacaagaaagttagagacagt
catgatggcctcattatataccgaaacatggcgcttttcttctccggtggagataggaaa
gagctgaaattacgagtaacaggaaggatatggaaagaacagcaaaaccctgaaggtgga
gtttgcataccgaacttgtgtagctag
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integrated database retrieval system
