Trifolium pratense (red clover): 123885548
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Entry
123885548 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3 isoform X1
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123885548
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123885548
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123885548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
FANCL_C
Motif
Other DBs
NCBI-GeneID:
123885548
NCBI-ProteinID:
XP_045790783
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Position
LG5:complement(52340014..52345022)
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AA seq
414 aa
AA seq
DB search
MAIRGIDFKWYDGFFLSMLATSVYPFSIPLIFLSFCIFNCHILYYTMLCILDTSISRVIV
AINWKRYHSCTYPLHIWIVVDYTAVFVFRLLMFVDNGFAAGMGLDFGWQQRYARFCGRVV
VLSILALLLYPFLWSWTIVGTMWFSSAKSCLPEEGQKWGFLIWLLFSYCGLLCIACMSVG
KWLTRRQAHLVRAQQGIPVSEYGILVDMIRVPDWAFEAAGQETRGMGQDAAAYQPGLYLT
PAQREAVEALIQELPKFMLKAVPTDCSECPICLEEFRVGNEVRGLPCAHNFHVECIDEWL
RLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSASVMTTTRYVRGQPSSQSYMLRLQGLL
RPVRAEIAGPVDDTDNALQNAENGVVPIVTHNAPNRVQVSSVECMPVSHSSPQS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggctatcagaggcatcgatttcaagtggtacgatggatttttcctttccatgctcgcc
actagtgtgtatcctttttcaatacccctaatttttctatcattttgcattttcaattgc
cacatactatactatactatgctttgtattcttgacacttcaatttctagagttattgtt
gcaatcaattggaagcgttatcattcttgtacatacccattgcacatttggattgtggtg
gactatactgctgtctttgttttccgcctcttgatgtttgtcgataatggctttgctgca
ggaatgggtttagattttgggtggcagcagagatatgctcgtttctgtggaagagtagtt
gtcctttcaatccttgcattgcttctttatccatttctttggtcctggactatagttggt
accatgtggttcagcagtgccaagagctgtttgcctgaagagggacagaaatggggattc
cttatctggttactttttagctactgtggacttctttgcattgcttgcatgtcagtgggg
aagtggttgactcgacgacaagcacacttagtgcgtgctcaacagggtatccctgtgtct
gaatatgggattttggtcgatatgatccgcgtgcctgattgggcatttgaagctgcgggt
caagaaacaaggggcatgggccaagatgctgctgcatatcaaccaggactttacctaaca
ccagctcagagagaagcagtcgaagctttaattcaggaactacctaagttcatgttaaaa
gctgttcctactgattgcagtgagtgccccatctgcttagaagagttccgtgttgggaat
gaggttcgtggcttgccttgtgcgcacaattttcatgttgaatgcattgacgagtggctt
agactgaatgtgaaatgtcctcggtgccgttgctcggtgtttccaaatctcgatcttagt
gccctatccaatctccgtcctgattctgaacgatcttctgccagtgttatgacaacaact
agatatgtgagagggcaaccttctagtcaaagttacatgttaaggttacagggacttctt
cgtccagtgcgtgctgaaattgcagggccagttgatgacacagataatgctttgcaaaat
gccgagaacggtgttgtacctattgtgacacacaatgcaccaaacagagtccaggtctct
tctgtggaatgcatgcctgtcagtcattcctctccacaaagttag
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