Trifolium pratense (red clover): 123885694
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Entry
123885694 CDS
T08949
Name
(RefSeq) condensin-2 complex subunit D3-like
KO
K11491
condensin-2 complex subunit D3
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123885694
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
123885694
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd3
SMC_hinge
Motif
Other DBs
NCBI-GeneID:
123885694
NCBI-ProteinID:
XP_045790953
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Position
LG5:37005860..37012089
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AA seq
1326 aa
AA seq
DB search
MEETISRIVTEIEDLRENHHIDNPQPLSEQSLTDLQTLLKNSQPLDPLYDAVSPSHLIPP
MATAMDSSPTPHSLLASNVFLSFLLSPNAPVFTLFTPLSFLSFLRSIRRSFKNHNPNTSA
QQVRKRKRNLKNKKSVQNDEDEPNSPNSVQKLDVRVLLPLFEKLVSVMSLIHLDRFPESL
KSLVQTISEVPVTAIETCGNEVQYSRLVGLCARILKEVLKPEHGEPSETAAEVLKALSPV
VVMPKSQVRSFAVGFVTSLARESDGVKKALVNFPRYLVHKAPDKAEPRALAVDFIMDVVR
VMELGDQVEFVKYVVKMTQGKTNLRLLGVDLILNLMTLLKDPLGVNSMEEEGKETWGLWC
LEALVKRCSDVSATIRGRALSSLAQVVGFLSVSDKASLVLKESMGFGDGNVVGVGGKEIN
EMLRRRCVDEKAIVRKAALLLVTNLTALLGGTIDEVVLKTMGMACSDSLVSIRKAAVASL
SEAFRTFSSETVITEWLHSVPRQIADNETSIQEECENVFQELVLDRISRAVAATSSYVES
TSSSKTKGKGLDNEMEMPFPQGILYLLREICNGEVSPWVKKICTNLGKKKRLNFKIVTAL
QNIIKVSESIWLNHSRPIEKWTAPQGAWFLLSEVSVFLPKAVDWDFLQHHWQLLDKHKVK
GEFRSPFAQKNAFENEESIECNNVAWASDRVFLLQTISNVSVELPHVPAAELAHNLLKRV
EKFNMHSTEVDAHIKALKTLCKRKASNDTEAEELVLRCVYQVLSRASEIIETFISDYSEQ
NAETDFFTPPRSGPSKGRKSVRKRKSLSKAITAIYTIGSLVVVCPSADMSTVSPLLHTII
TSGKSVPKLNKLPGSATSLQEEAPSFYIQGWLTMGKLCLADGKLAKNYIPLFVQELEKTN
LAALRNNIVVMMADFCVRYTALIDGYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKW
RGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKSPLLAYNSFVEAVFVLNDCHAHTGHR
ESNESRTESQLFSIRGTDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCSEILAAASDGL
LNIEDATGQSVLQDTFQILGCKEIRFQSTRVSSESADLEEEGGENGSSTRKAITQAVKKG
LIQNTVPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDM
QKYEAAKAKATVAEAVASKPKSAAFQSPVSKNPTKEHVETHVQGEESDKFPSGSKIASAL
ADAAAAATARSVLKEINKGTATPQLSSLNVPKVKSFTGECVSRGDRRLDLIKSLQKKHCF
DSDDEN
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacaatatcccgcatcgtaacagaaatcgaagacctccgtgaaaaccaccac
atcgacaacccacaaccactctccgaacaatctctcaccgatctccaaaccctcctaaaa
aactcccaacccttagacccactctacgacgccgtttcaccttctcacctcattccacca
atggccaccgcaatggattcatcaccaactcctcactctcttctcgcttctaacgttttc
ctctcttttctcctctctccaaacgctcccgttttcactctcttcactcctctttcattt
ctctccttcctccgttcaattcgtcgttcattcaaaaaccataaccctaataccagcgct
caacaagttcgaaaacgaaaacggaatttgaaaaacaaaaaatcggttcaaaatgatgaa
gatgaacctaattccccaaattctgtacagaaactcgatgttagggttttacttccgctt
tttgagaaattagttagtgttatgtccttaattcatctcgatcgttttccggaaagtttg
aaatctttagttcaaacaatttcagaggttccagtgacagctattgagacttgtggaaat
gaggttcaatatagtagattggttggtttgtgtgcgaggattttgaaagaggttttgaaa
ccggagcatggtgagccttcagagactgctgctgaggttttgaaggcgttgtctccggtt
gttgtaatgccgaaatctcaggttaggagttttgctgttggttttgttactagtcttgct
agggaatctgatggtgtgaagaaagcgttggttaattttccgaggtatttggtgcataag
gcgcctgataaagctgagcctagggcgttggctgtggattttataatggatgttgttagg
gttatggaattgggggatcaggttgagtttgtgaagtatgttgtgaagatgactcaaggg
aaaaccaatttaaggcttttgggggttgatcttattttgaatttgatgactttgttgaag
gatcctttaggggtgaattcgatggaggaagaagggaaagaaacgtggggattgtggtgt
ttagaggcgttggtgaagcgttgttcggatgttagtgctacgattcgagggcgggcttta
tcgagtttggcgcaggttgttgggtttctatcagttagtgataaggctagtttggttttg
aaagagtctatggggtttggtgatggcaatgttgtgggtgtgggaggaaaggaaatcaat
gagatgctgaggagaaggtgtgtggatgagaaggcgattgtgagaaaagctgctcttttg
cttgttactaacttgactgctctactcggaggtacgattgatgaagtggtgcttaagaca
atgggaatggcttgttccgattcacttgttagcattcggaaagcggctgttgcatctctt
tctgaggctttcagaacattctcatctgaaacagtaataactgaatggctacattcagtt
cctcgtcaaatagctgacaatgaaactagcatccaagaagaatgtgagaatgtgtttcaa
gaacttgttttggaccgaatatctagagctgtagctgctacctcttcatatgtcgaatct
acgtctagtagtaaaacgaaaggaaaaggtttagacaacgagatggagatgcctttccca
caaggaattctgtatctcctgagagaaatttgcaatggagaggtgagtccttgggtgaaa
aaaatttgcacaaacctgggcaaaaagaaacggttgaatttcaaaattgttactgcactt
cagaatataatcaaggtgtctgagtctatctggctgaaccatagcaggccaatagaaaag
tggactgctccacaaggtgcttggtttcttttatcagaggtgtcagtattccttccaaaa
gcagtggactgggattttcttcaacatcattggcagcttcttgacaaacataaagtgaaa
ggtgagtttagaagcccatttgcacagaaaaatgcatttgaaaacgaagaaagcatagaa
tgcaataatgttgcctgggctagtgaccgagttttcctcttgcaaacaatctctaatgtc
tctgtggaactgccacatgtacctgctgctgaattggctcataatttactcaaacgggtt
gaaaaattcaacatgcattcaacagaggttgatgctcatataaaagcacttaaaacactg
tgcaaacgaaaagcttcaaatgacacggaggcagaagaattagtcttgagatgtgtatac
caagttctatccagagcttctgaaataatagaaacttttatttcagattattcagagcaa
aatgcagaaactgacttcttcactccacccagaagtgggcccagtaaaggtaggaaatca
gtaagaaagcgcaagtcattgtcaaaagcaattacagcgatttatacaattgggtcttta
gttgttgtctgcccctctgctgatatgagcactgtaagtccattattgcacactatcatc
acctctgggaaatctgtcccaaaattaaataagctaccgggctctgcaacttctctacaa
gaagaagctccttctttttatattcaagggtggctgaccatgggaaaactttgccttgct
gatgggaagcttgcaaagaactatattcctctgtttgtacaggagcttgaaaagaccaac
ttagcagctcttcgcaataatattgtggtcatgatggcagacttctgcgttcggtacact
gctcttattgatggttacataaccaagatcacaaggtgtctcttagatccctgtgaactt
gtgagaaggcaaacattcatattgctatcaagattgttgcagagggactatgtcaagtgg
agaggagtgctatttcttcgtttccttttgtcacttgttgatgaatcggaaaagattaga
cagctagcagattttcttttcggaaatattttgaaagtcaagtctcctcttttagcatat
aatagttttgtggaggctgtttttgttttgaatgactgccatgcccacactggacaccgt
gagtccaacgaatcacgaacagaaagccaacttttttccatcaggggcactgatgaaaga
tcaaggtcaagaagaatgcacatttatgtttctctactaaagcaaatggctcctgagcat
cttctagcaacctttgccaagttatgttcagaaattctagctgcagcttctgatggtttg
ctcaatatagaagatgcaactggacagtctgttctacaggatacttttcaaattcttggc
tgtaaagagatacgctttcaatctactcgtgtatcatctgagtcggcagacttagaagaa
gaagggggagaaaatggatcttcaactaggaaggctataactcaggcagtcaagaaaggc
cttattcaaaacactgtacccatcttcatagagttgaaacgtctgttggaaaccaagaac
agtcccctcataggctctctcatggagtgccttcgggtccttctcaaggactacaaaaat
gagattgatgacatattggttgctgataaacagctgcagaaagagcttatctatgacatg
cagaaatatgaagcagcaaaagctaaagcaacagttgctgaggctgtagcctccaagcca
aaatcagctgcatttcaatcacctgtttctaagaatccaaccaaagaacatgttgaaaca
catgtacaaggtgaggagagtgacaagtttccaagtggttcaaaaattgcttcagcattg
gcagatgctgcagctgcagcaacagctcgttctgtgctcaaggaaattaacaagggtaca
gcgacaccacaacttagttccttgaatgttccgaaagtcaagtcttttactggtgaatgt
gtatctagaggtgataggcgactggatctcataaaatctttgcagaaaaaacattgtttc
gattctgatgatgaaaactaa
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