Trifolium pratense (red clover): 123885860
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Entry
123885860 CDS
T08949
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123885860
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
123885860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
123885860
NCBI-ProteinID:
XP_045791158
LinkDB
All DBs
Position
LG1:complement(34298752..34322355)
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AA seq
1613 aa
AA seq
DB search
MDQSQNQRSLSTTTPSRSVQFHPARVPILDLFNLYLGLGRNSRNKPDDSLREPPNKTQKR
VHAINRELPPPNEQFIIDFEQLQSQFPDHEQLRSVTEAMLIPLVVQCSGHGPRSDFLLFA
LRSLCGIGCINWDTFLPSLLSSVSSAELPVGQTSQAVSTVTSSSLSQSGMLPPPSTVANS
SNFQSSNPASPLTSVHTIGSPAQSSIEPLSCAALSPVKSSDNSSAGQQSKVRGSLSVRNN
DISNSCLRQLCCKIILTGLEFNLKPVTYAEIFHHMLNWLVNWDQRQQAVDESDIPKSWRP
DKTVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRD
MMAMHMQMLDQHLHCPTFGTHRILNQTPPISSEATTHLRLSPISYLSVLGEPLNGEDITM
SVRKGSLDWERAVRCIRHALRTTPSPDWWRRILVLAPCYRPPTQGPTAGGVFSSEMICEA
TIDRIVELLKLTNSEINCWQEWLVFSDIFYFIMKSGCIDFVDFVDKLVSRLTDGDHRILR
TNHVTWLLAQIIRIELVMTALNTDTRKVETTRKVLSFHREDRSSDPNSPQSILLDYVSSC
QNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQASKGDRMIDYMNMDERSIGMFWVVTYT
MAQPACETVMSWLNSAGVTDLIPATNLQPAERLMGTREVSPLPMSLISGFSMNLCLKLSY
QMEDALFSGQAVPSIAMVESYTRLLLIAPHSLFRSHFNHLVQKSPSLLSKPGATLLVLEI
LNYRLLPLYRYQGKSKTLMYDVTKIITALKGKRGDHRVFRLAENVCLNLIFSMRDFFLVK
RDGKGPTEFTETLNRVCVITLAILIKTRGIAEAEHLLYLQSMLEQILAIGQHTWSEKTLR
YFPPVLREALSGLPDKRSVAVQAWQQAETTVIHQCTQLLSPSADPSYVTTYLSHSFPQHR
QYLCAGALILMHGHAENINSGNLARVLREFSPEEVTSNIYTMVDVMLHHMQIELQQGHLI
QDLMLKACASLAFFVWTNELLPLDILLLALADRDDDPHALRIVISLLDRQELQQRVKLFC
ITRGHPEHWLYTGMFKRVELQKALGNHLSWKDRNPVFFDDIAARLLPVIPLIIYRLIEND
AMDTAERLLALYSPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPFSESF
PQQISSSNPAMCPPLDYFTTLLLGIVNNVIPPLHNNSKSGPIGDASNSAMRTAQNKPPAV
SQSGPANASEGQKAFYQIQDPGTYTQLVLETAVVEILSLPVSASQIVQSLVQIVVNIQPT
LIQSNDSLHGSSNGIGQGSVLPTSPSGGSTDSLGASRSTPSASGVNTTNFASQSGYTSQQ
LSCLLIQACGLLLSQLPSDFHAQLYLEATRIIKENWWLTDVKRSLAEIDSAVGYALLDPT
WAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGANVIIKQLRPVTSVAMLRIAFRIMGPVL
PKLANAHTLFSKTLSILLTVLVDVFGKNSQTSIAVDASEIADIIDFLHHVIHYEGQGGPV
QASSKPRPDILALLGRAAESLRPEFQHLLSHLNTDVNSSVYASSHPKLVPNPT
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatctcaaaaccagagatcactttcaacaacaacaccatcgcgttctgttcaa
ttccacccagctcgtgtaccaattctcgatctcttcaacctctacttaggacttggtaga
aacagtcgcaacaaacccgatgactcactccgtgaaccaccgaacaagacgcagaaacgt
gtgcacgctattaacagagaacttcccccgccgaatgagcaattcattattgattttgag
caacttcagagtcagtttcctgaccatgagcaattgcgttctgtgacagaagctatgctt
ataccgctcgtcgtacagtgtagtggtcatggaccgcgatcagacttccttctttttgct
ttacggagcttgtgcggtattggatgcattaactgggatacctttcttccgtcccttctt
tcttcagtttcttcggcagaattaccggttggtcaaacgagtcaagcagtgtcaacagtc
acctcttctagcttatcacagtcgggaatgctgcctcctccaagcacagttgctaattct
tctaattttcagtcttcaaatcccgcatctccattgacttctgtccatacaattggctcc
cctgcacagtcatctattgagccgctgtcatgtgcagctttatctccggtaaaatcatct
gataattcatcggctggacaacagtctaaagtaagaggcagcttatccgttcgaaataat
gatatcagtaacagttgccttcgccagctatgttgcaagattattttaactggtcttgag
ttcaatttaaaacctgtgacatatgctgaaatcttccaccatatgctgaattggctggtg
aactgggaccagagacagcaagcagttgacgaatctgatattccaaaatcatggagacct
gacaaaaccgtaattgcatggctacatagttgcttggatgtgatctggcttttagttgat
gagggaaaatgccgggttccattttatgaattattacgtagtgatttgcaattcatagag
aatataccggatgatgaagcattatttacacttatcttggagatccataggagacgagat
atgatggctatgcacatgcaaatgttagaccagcatcttcattgccctacatttgggact
catcggatcctgaatcagacaccacctatttcaagtgaagcaacaacacacctgcgacta
tcaccgatctcatatttaagtgtacttggagaaccattgaatggagaggatattacaatg
tctgttcggaagggaagtttggactgggagagagctgtacgttgcatcaggcatgctctc
cgtactactccttcacctgattggtggagacggatactggtgctcgctccttgctacagg
cctccaactcaggggcctactgctggtggtgttttttcttcagagatgatctgtgaggca
actattgatagaattgtagaactattgaaattaacaaattcagagataaattgctggcag
gaatggcttgtcttctctgatattttctattttattatgaaaagtgggtgcattgatttt
gtcgattttgtggacaagctggtgtcacgtcttacagatggtgatcatcgtatacttagg
acaaatcacgttacttggctgcttgcacagataatacgaattgagctggtcatgactgct
ttgaatacagatactagaaaggtggaaacaaccagaaaagttttatcatttcatagagaa
gacagaagttcggatcctaatagtcctcaaagtatcttgcttgattatgtaagcagttgt
caaaatttacgtatatggtcattgaacacttcaaccagagaatacctgaataatgaacag
cttcaaaaaggaaagcaaatagatgaatggtggagacaagcaagcaaaggagatcgaatg
attgattatatgaatatggacgaacgctcaatagggatgttttgggttgtgacctacaca
atggcacagcctgcttgtgaaacagtaatgagctggttaaattctgctggagttactgac
ttgataccagcaacaaatcttcaaccagccgagagattaatgggtacacgagaagtgagc
ccgttgcccatgtcattgatatcggggttttcaatgaacctatgtttgaagctgtcttat
caaatggaggatgctctgttttctgggcaggctgtacccagcattgcaatggttgagtca
tatactagattgctgcttatcgcacctcattcactattccgctcacatttcaatcatttg
gtgcaaaaaagtccttctctgttgagcaagcctggcgcaacacttttggtgcttgagata
ttgaactaccgactacttccactttacaggtatcagggaaagagcaaaaccttgatgtat
gatgttacaaagataattactgctctaaaaggaaaacggggagatcatagagtattcaga
ttagctgaaaatgtgtgcttgaatcttatattctcaatgagagatttcttcttggttaaa
agggacggaaagggcccaacggaatttactgaaactttgaacagagtgtgtgttataaca
cttgctatacttattaagactcgtgggattgcagaggctgagcacctgctttatctccaa
agcatgttggaacaaattctggcaatcggccaacatacatggtcagaaaaaacactacga
tacttcccgcctgttcttcgtgaagcactgagtggtctaccagataaaaggagtgttgca
gtccaagcatggcagcaggcagaaacaactgttatacaccagtgcacccagcttctttca
ccttcagcagatcctagttatgttacgacttatctcagccatagtttccctcagcataga
cagtatttgtgtgctggtgcgttgatattaatgcatggccatgcagaaaacattaacagt
ggaaacctggcacgcgtactgcgggaattttctcctgaagaagtgacatctaacatttat
acaatggttgatgttatgcttcatcatatgcaaatagagcttcagcaaggacacctgata
caggaccttatgttaaaagcctgtgcaagccttgccttttttgtttggacaaatgagtta
cttcctttggatatcttgcttcttgcacttgctgaccgtgatgatgatccacatgctttg
cgtattgtgatcagtttgcttgataggcaagagcttcagcagagagtaaaactcttttgt
ataacccgtgggcaccctgaacattggctttacacaggaatgttcaagcgggttgagcta
caaaaggcacttggaaatcatctttcgtggaaggataggaatcccgtgttctttgatgat
attgcagcacgtttgcttccagtcatccccttaattatttacagacttattgaaaatgat
gcaatggatacagcagaaagactactggccctatattctccattgcttgcttattaccct
ctaagatttacttttgttcgtgatatacttgcatatttctatggtcatcttcctggaaaa
ctcattgttcgaatactcaatgtacttgacatcagtaagattcccttttcagagtcattc
ccacagcaaataagttcgtcaaatcctgccatgtgccctccactggactattttacgact
ctattgttgggaatagtaaataatgtaattcctccactacataacaattcaaaatctgga
cccattggagatgcatcaaacagtgcaatgcgtactgcacaaaacaagcctccagcagta
tctcagtctggaccagcaaatgcttctgagggccaaaaggcattctaccaaattcaggat
cctggcacatatactcagctggttcttgagactgctgtcgttgaaatactttcccttcct
gtatctgcctctcagatagtacaatcacttgttcaaattgttgttaatatacaaccaaca
ttgatccagtccaacgattctctccatggctcctcaaatggtataggacaaggttcagtg
ttaccaacatcaccttcagggggaagcacagattccttaggtgcaagtagatcaactcct
tcagcttccggtgtaaataccactaactttgcttcgcaaagtggttatacaagtcaacaa
ctgtcttgcttgttgattcaagcttgtggcctccttctgtctcagcttccttctgatttt
catgcacaactttacttggaggcgacacgtataataaaagagaactggtggcttacagat
gtgaaaaggtcactcgcggaaattgactctgctgttggctatgctttgttagatccaaca
tgggctgcacaggacaatacctccacagccatcgggaatgtggttgcattgcttcattct
ttcttcagtaacctacctcaagaatggcttgaaggggctaatgttatcatcaagcaactt
cggccagtaacatcagttgcaatgttgaggatagcattccgtataatgggcccagtcctt
ccaaaacttgccaatgctcatacacttttcagcaagactctatctatactcttaaccgta
ttagtggatgtatttggaaagaactcccagacatcaattgccgttgatgcatcagagata
gcagatattattgacttccttcatcatgtcattcactatgaagggcagggagggcctgtg
caggctagcagcaaaccgcgaccagatattttggcactccttggaagggcggcagagagt
ttacgcccagaatttcaacatctgctctcacacttgaatactgatgtgaattcttctgtt
tacgcatcttcccatccgaagttagtcccaaatccaacttag
DBGET
integrated database retrieval system
