Trifolium pratense (red clover): 123885965
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Entry
123885965 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123885965
04121 Ubiquitin system [BR:
tpra04121
]
123885965
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123885965
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123885965
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123885965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
Zn_ribbon_19
zf-RING_UBOX
Zf_IFT144_1st
zf-RING-like
zf-HC5HC2H_2
zf-RING_5
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
123885965
NCBI-ProteinID:
XP_045791257
LinkDB
All DBs
Position
LG5:7367381..7368385
Genome browser
AA seq
308 aa
AA seq
DB search
MENEQWCSICSKMVSPMIESRNKCPFCDTQFGVEMENLRDHNNDAIDLRSAWVFSLYAPI
FLGLMNAFSPSLATISSQESSTSRNEENNEQERGNYNELVIGRRRRTSTYMMHLFRGLHV
RMVSENENIEQNRNIENNNNNNNNTTNNNSIFVIDPFNEGALIVRGPNLNHTNSGFDLLL
QHLAQINPSGYASVNPPTKKEAIEEMENVINDEKLLCTICLEDVEIGSIAKEMPCKHKFH
DECIVSWLNLHSSCPVCRFQMPSEDSNVLANLEIGNRENQNNEVVRGRNGRRNWFPVLQS
FNNFLPFP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgagcaatggtgcagcatatgctctaaaatggtaagtccaatgattgaatca
agaaacaaatgtccattttgtgatacacaatttggtgtagaaatggaaaatcttagagac
cataataatgatgctattgatttaaggtcagcttgggttttttcactttatgcaccaatt
tttcttggtttaatgaatgcttttagtccttctctagctacaatttcttcacaagaaagt
agcacctcaagaaatgaagaaaataatgaacaagagagaggaaattacaatgaacttgta
attggaagaaggagaagaacttcaacttatatgatgcatctatttagaggacttcatgtt
agaatggtttctgaaaatgaaaacatagaacaaaataggaacattgagaataataacaat
aataataacaatactactaataataatagtatatttgttattgatccattcaatgaaggt
gcattaattgtgagaggtcctaatttaaatcatacaaatagtggatttgatttattgcta
caacatttggcacaaattaaccctagtggttatgctagtgtgaatcctccaacaaagaag
gaagcaattgaagaaatggaaaatgtgataaatgatgagaaattgctatgtactatatgt
ttggaagatgttgagattggaagtatagctaaagaaatgccatgtaagcataaatttcat
gatgaatgtattgtatcatggcttaatctacatagttcttgtccagtttgtaggtttcaa
atgccttctgaggattcaaatgttttggctaatttggaaattggaaatagggagaatcaa
aataatgaggttgtgagaggtcgaaatggaaggaggaattggtttccggtgcttcaatct
tttaataatttccttccttttccttga
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