Trifolium pratense (red clover): 123886485
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Entry
123886485 CDS
T08949
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123886485
03036 Chromosome and associated proteins [BR:
tpra03036
]
123886485
Transcription factors [BR:
tpra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
123886485
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
123886485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
HMG_box
Rttp106-like_middle
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
123886485
NCBI-ProteinID:
XP_045791759
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Position
LG1:41868031..41873496
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AA seq
642 aa
AA seq
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MTDGHLFNNITLGGRGGTNPGQIKIYSGGIFWKRQGGGKSIDVDKADITGVTWMKVPKTN
QLGVQIKDGLFYKFTGFRDQDVVSLTNFFQNTFGVTVEEKQLSVTGRNWGEVDLNGNMLA
FMMGSKQAFEVSLADVSQTNLQGKTDVILEFHVDDTTGANEKDSLMEMSFHVPNSNTQFV
GDENRPSAQVFRDKIMSMADVGAGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAMS
EDLYNSKYKDKLELSYKGLIHEVFTTILRGLSGGKVTKPGKFRSCQDGYAVKSSLKAEDG
ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ
RNEYHNLYGFISSKGLKIMNLADAQPTVGGVAKVLENDDDDAVDPHLERIRNEAGGDESD
EEDSDFVLDGDDGGSPTDDSGADDSDASQSGGETEKPPKKEPKKDLPSKPSTSKKKSKDA
DEGGPKKKQKKKKDPNAPKRALSGFMFFCQMERENLKKTNPGISFLDVGRVLGEKWKNLS
AEEKEPYEAKAQADKKRYKDELSGYKNPQPMNIDSGNESDSA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcatctcttcaacaatattaccctcggcggccgtggcggaactaatccg
gggcagataaaaatatattctggaggaattttttggaagagacagggtggtggtaaatca
attgatgttgataaggctgacataacgggtgtcacatggatgaaggttccaaagacgaat
caacttggtgttcagatcaaagatgggctgttctacaaattcactggtttccgtgatcag
gatgttgtaagcttgaccaattttttccaaaacacttttggagtaactgttgaggagaag
cagctttctgttactgggcgcaattggggagaagttgatctaaacggaaatatgctggct
tttatgatgggttcaaagcaagcttttgaggtgtctttagcagatgtctctcaaacaaac
cttcaggggaaaactgacgtgatattggagttccatgtggatgacacaactggagcaaat
gagaaagattctttgatggagatgagtttccacgtaccaaattccaacacccagtttgtt
ggtgatgaaaatcgcccttctgctcaggttttccgtgataaaataatgtctatggctgat
gtcggtgctgggggagaagatgctgttgttacatttgatggtattgcaattcttacacca
agaggacgatacagtgttgagttacacctgtcattcttgaggcttcaaggacaggctaat
gatttcaaaatccagtacagcagtgttgtccgcctatttttacttcctaagtctaatcag
ccgcatacctttgtcattattagtcttgatccccctattcggaaaggacagactttgtac
cctcatatcgtgatgcagtttgaaactgattatgtggttgaaagtgaattggcaatgagt
gaagatctttataactcaaagtacaaagacaagctggagctgtcttacaaggggcttatc
catgaagtgttcaccacaatattacgtggtttgtctgggggcaaagttaccaagcctgga
aaatttaggagttgtcaagatggttatgcagtgaagtcatctttgaaagctgaagacgga
attctgtatccccttgagaagagcttcttctttctgcctaaacctcccactcttattctt
catgaagagattgactatgtggaatttgagcgacatgctgctggtggttcaaacatgcat
tattttgaccttcttatcagactaaaatctgagcaagagcatctcttccgtaatattcag
agaaatgaataccacaatttatatggttttatcagttcaaagggcttgaaaatcatgaat
ttagctgatgcccaaccaactgttggtggtgtggctaaggttcttgagaatgatgatgat
gatgccgtcgatccacatcttgagcgcatccgaaatgaagctggtggagatgaaagtgac
gaggaggattcagattttgtccttgacggggatgatggaggttctcctactgatgattct
ggtgcagatgactctgatgctagccaaagtggcggtgagacagagaagcctcccaagaag
gaaccaaagaaggatctgccgtctaagccatctacttctaagaagaaatcaaaagatgct
gatgaaggaggaccaaagaagaaacagaagaagaaaaaggacccaaatgcacctaagagg
gcactgtctggtttcatgttcttttgtcagatggaaagagagaatctgaagaaaactaat
cccggaatttcatttcttgatgtgggaagagtacttggagagaaatggaaaaatctgtca
gcggaggagaaggaaccttatgaggcaaaagcccaagcggataaaaaacgttacaaggat
gagcttagtggctacaagaatcctcaacctatgaacattgattcaggaaatgaatccgac
agtgcctaa
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