Trifolium pratense (red clover): 123886550
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Entry
123886550 CDS
T08949
Name
(RefSeq) proteasome subunit alpha type-1-B-like
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
123886550
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123886550
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tpra03051
]
123886550
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123886550
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
123886550
Peptidases and inhibitors [BR:
tpra01002
]
Threonine peptidases
Family T1: proteasome family
123886550
Proteasome [BR:
tpra03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
123886550
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123886550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
123886550
NCBI-ProteinID:
XP_045791815
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All DBs
Position
LG1:complement(41931809..41934042)
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AA seq
279 aa
AA seq
DB search
MFRNQYDTDVTTWAPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVCT
QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFNNFT
ASSREDLIKDALIATRESLQGEKLKSSVCTIAVVGVGEPFHILDQETVQQLIDTFEIVRE
EEIAPADPEPAAEQGAAADQGGTENQGGAENQGGSPMDI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaaccaatacgacaccgacgttaccacatgggcaccggcgggaagactcttc
caagtagagtacgccatggaagcagttaaacaaggttcagccgcaatcggtctccgatct
aaaactcacgtggttctcgcgtgtgttaacaaagcaaattctgaactttcttctcatcag
aagaagatctttaaggttgatgatcatatcggtgttgctatcgccggtctcactgctgac
ggtcgtgttctttctcgttacatgcgatctgaatgcattaactataattacacttatgaa
tctccacttccggttggtcgtttggttgttcagcttgctgataaggctcaggtatgcact
cagagatcatggaagcgtccttatggggttggtcttttggtagctggattagatgaatca
ggggctcacctctattacaactgtccaagcggaaattacttcgaatatcaggctttcgca
attggttcacgttcacaagcggcgaaaacgtatttggaacgcaagtttaacaacttcacg
gcctcctcccgggaagatctgatcaaagatgcactcattgcaactagggagtccttgcaa
ggtgaaaagctcaagagctccgtatgcaccattgctgtggttggagtcggtgagccattc
cacattttggatcaagaaactgttcaacagttgatcgatacttttgagattgtgagggag
gaagaaattgcacctgctgatcctgagccagcagctgagcaaggtgctgccgcagatcaa
ggtggtactgaaaaccaaggtggcgctgaaaatcaaggtggttctccaatggatatttga
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