Trifolium pratense (red clover): 123887089
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Entry
123887089 CDS
T08949
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123887089
03012 Translation factors [BR:
tpra03012
]
123887089
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123887089
mRNA cycle factors
Stress granule specific factors
123887089
Translation factors [BR:
tpra03012
]
Eukaryotic type
Initiation factors
eIF-4
123887089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
CNOT1_CAF1_bind
Motif
Other DBs
NCBI-GeneID:
123887089
NCBI-ProteinID:
XP_045792326
LinkDB
All DBs
Position
LG5:56637142..56647024
Genome browser
AA seq
1698 aa
AA seq
DB search
MSFNQSKTEKNDAVYRKSGRSSSFNQQRGPSGAYGRGSGGPAPSLSSNKSFNKKSNNAQG
GQYRVNPSPVNSTDSNNAPAGRGIHNGTHVQPQLHGASDGPVAKASESTAQRSPKVVPNA
PTSQSPPVVSSDTTAPTSPAKGDASKAFPFQFGSIVPGFMNGVAIPPRTSSAPPNLDEQK
HAQAHHDSVRSAVPSVPIPPVPKQQQPPRNDAGVTDKSNARETHLGAKAKKDPQVPVLTP
ASQTQKPSVVPVTGISMSTPFQQPQAPLQFGGPNPQIQSQGMPSTPLHIPLPMPIPIGNV
PQVQQPVFVPGLQHHPMHPHGIMHSGHNISFTHQMGHQLPHQLGNMGIGMGPQYPQQQGG
KFTGPRKTTPVKITHPDTHEELRLDKRTDGYSDGGSSGARSHPNVPSQSQPVKSIATSQP
TNYYPSSSYGSNSPYYQPNSLPLTSSQITPNAQPPIFNYPVNNGPQNVAFMNSPSLNSQP
VNKVSTPIPRIAEPPTVERSREVPNVISSAPTGVASVTIKPSGVSAVAESSLTNSSICGV
QNNETPSSAASCDTSSPLPQKGSETFSEISTGKSKSSEDSSVLSSLPKQAAASVVGAEKL
TMPPSSAVTVDSVSVVTNNEASMREPISGSNSLKDNQKKPGKQGQSSQDQDSVQSPRAAN
VTSGAVESGISDTKVSTPVGSETNHSSADLPISEGSIAKAADSLSDHKHDKIDESSEDLQ
SADVPETTKEINDSAENACSDSMSLSASGIKDRPNLEANKAKVTSKGKKKRKEILQKADA
AGSTYDLYNAYKGPEEKKETVLISESTENESTSEGLKQLSPDSAQLDSPASEKCGHNKAE
PDDWEDAADMSTPKLGVDVKSQQVIDGIGSTAKKYSRDFLLKFAEQCITLPEGFEITADI
ADPLMSFNNSRDSHPSPGRTDRSRMERRVNVVAEEDRWNKGANAFHSGRGLDGIGSNSGR
HGQGRNFGVLRNPGGQVSPQMAGGILSGPMQSGGNQGGMQRNSPDGERWQRSTSFQQRGL
IPSPQSPLQMMHRAEKKYEVGKVSDAEEAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDN
AVTLTGVISQIFEKALMEPTFCEMYANFCSHLATELPDLSVDNEKITFKRLLLNKCQEEF
ERGEREQEEANKADEGEVKLSNEERELRRTKARRRMLGNIRLIGELYKKKMLTERIMHEC
IKKLLGQCQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDVYFERLRVLSNNMNLSSRVR
FMLKDVIDLRRNRWQQRRKVDGPKKIEEVHRDAVQERQAQAQVGRMGRGMGNNQSARRMD
FGARGSSMLSPPAQMGGPRGLPTQARGYGLQDARFEERQSYEPRPLSVNFPQRPLGNDSI
TLVPQGGLARGMSIRGSTASHLSIPDVHSSHGDPHRMAGGINGYSNSSERTPYGSREDLA
SRYISDRSSSLAGYDHSSAPGHNINYGNRDLRNDDRNLDRPVTTPPHTQLQGPIVSQNAS
SENAWPEEQLRNMSLSTIREYYSARDVNEVAQCIRDLNSPAFHPSMVSVWVLDSYERKDT
ERDLLAKLLVKLGKSQDGLLSQTQLNEGFVKVLSNLEDDVNDAPKAPEFLGCIFAELIIE
SIVSLNEIGQVIHDGGDPPGSLLEVGLAADVLGSTLEAIKHEKGDTVLSEIQTGSNLRLE
TFRPPNTSTTSRKLEKFI
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatcaaaaaccgaaaagaacgacgccgtttatcgaaaatctgggcga
tcgtctagctttaatcagcagagaggtccctcaggtgcttatggaaggggcagcggcggg
cctgcaccgtcactctcctctaacaagagttttaacaagaagtctaataatgcacaaggt
gggcaatatagggtaaacccttccccagtgaattcaacagactcaaacaatgctcctgct
ggtcgaggcatacataatggtactcacgtgcaaccacaattgcatggagcatctgatggg
ccggttgcaaaggcatctgaatcaacagcgcagaggagccctaaagttgttccaaatgca
ccaacttctcaatctccccctgttgtgagctctgatacaaccgctcctacaagccctgct
aagggagatgcatcaaaggcgttcccttttcagtttggatcaattgttcctggctttatg
aacggggtggcaattcctcctcgtacaagctcagctcctcctaatttagacgaacagaag
catgctcaggcccatcatgactctgttagatccgctgtgccttcagtgccaatacctcct
gttccgaagcagcagcaaccacctaggaatgatgcaggtgtaactgacaaatctaatgcc
agggagactcatctgggggctaaggctaaaaaggatcctcaggtgccagttttgacccca
gcaagccagacacagaagccttctgttgttcccgtaactgggatttcaatgtcaacacca
tttcagcagccacaggcacctttacagtttggtggtcctaatccacagattcaatctcag
gggatgccctcgacacccctccatattcctctaccaatgcctataccaattggaaatgtt
ccacaagtgcaacagccggtttttgttccaggtcttcagcatcatccaatgcaccctcat
gggatcatgcattcaggccataacataagtttcactcatcaaatgggtcatcagttgcct
catcaattgggcaacatgggcattggcatgggccctcaatatccccagcagcaaggtgga
aaatttactggtcctcgaaaaactactcccgtcaagataactcatcctgatacacatgaa
gaactgaggcttgataaaaggacagatggatattcagatggtgggtcatctggtgctagg
tcgcatcctaatgtaccttctcaatctcaacctgttaaatccattgccacttctcagcct
acgaattattatccttccagctcatatggttccaattctccttattatcaacctaattct
cttccattaacaagtagccagataactcccaatgctcagccaccaatatttaattatcct
gtgaacaatggtccacaaaatgtggctttcatgaattcgccgtctcttaattctcagcct
gttaataaagtcagcactcctattcctcgcattgctgaaccccccactgtagaacgttct
cgtgaagtacctaatgtgatatcatcagctccaacgggggtggcttctgtgactattaaa
ccaagcggtgtgtcggctgttgcggagtcatcattgactaattctagtatatgtggtgtt
caaaataacgagactcccagttcagcagcatcttgcgatactagctcccctttaccacaa
aaaggatctgaaacattctcggaaatctctacaggaaaatctaaatcttctgaggattct
tcagttttgagttcgttgccaaaacaagctgctgcatctgttgtcggtgccgagaagctt
acgatgccaccttcttcagcagtcactgtggattctgtttcagttgtgactaataatgaa
gccagcatgagggaacctattagcgggtccaactctttaaaggataaccagaagaaacct
gggaaacaaggtcaatcatctcaagatcaggactctgtgcaatctcctcgagcggcaaat
gtgacgtctggagctgttgaaagtggtatatcggatactaaggtttccacacctgtagga
agtgaaacaaaccattcttctgcagatcttcccatatctgaaggatctattgctaaagcg
gctgatagtttgagcgatcataagcatgataagatagatgaatcatctgaagatctgcag
tctgctgatgtaccagaaacaacaaaggaaattaatgacagtgcagagaatgcttgcagc
gactcaatgtctctttcagcgtcaggtatcaaggatagaccaaatttagaagcaaataaa
gcaaaagttacatctaaagggaagaagaaaagaaaagagattctccagaaagcagatgct
gccgggtcaacttatgatctttataatgcatacaaaggacctgaggaaaagaaagaaact
gtgttaatttcagagagcacagaaaatgaatctacatctgaaggtttaaagcagttatct
ccagattctgctcagttagattctcctgcaagtgagaaatgtggtcacaataaagccgaa
cctgatgactgggaggatgcagctgacatgtctacaccaaaacttggagttgatgttaaa
tctcagcaggttattgatggaattggaagtaccgcaaaaaagtactcacgcgattttctt
ttgaaattcgcagagcaatgcattactcttcctgaaggttttgaaattacggcagacatt
gctgaccctttgatgagtttcaataattctcgtgattcacatcctagtcctggcagaact
gacaggtcaaggatggaacgccgtgtgaatgttgtggctgaggaagatagatggaataaa
ggtgccaatgcttttcattctgggcgtggtttggatggtattggtagtaatagcggtcgg
cacggtcaaggaagaaattttggtgttttaagaaatccaggtggacaggtatcccctcag
atggctgggggtatcctttctggaccaatgcaatctgggggaaatcagggtggaatgcaa
agaaatagccctgacggggagaggtggcagcgttctactagcttccagcagaggggttta
attccctcacctcagtctcccttacagatgatgcacagggccgagaaaaagtatgaagta
ggtaaagtctcagatgcggaagaggcaaagcagaggcagctgaaggctatcttgaacaaa
ctaactcctcagaattttgatagactttttgaacaggtaaaagcagttaatattgacaat
gcagtcactctcactggtgtcatctcacaaatcttcgagaaggctctgatggagcctacc
ttctgtgaaatgtatgccaacttctgctcccatctggctactgagttgcctgatttgagt
gtggacaatgaaaagataactttcaaaaggttattattaaacaaatgccaggaggaattt
gagaggggtgaaagagaacaagaagaggcaaataaggctgatgagggtgaggtgaagcta
tcaaatgaagaaagggagctgagaagaaccaaggcaagaaggcgcatgttaggaaacata
agattgattggagaactatataagaagaaaatgttgacagagaggataatgcacgagtgt
atcaagaagttactaggtcagtgtcaggatcccgacgaggaagatgttgaagctttgtgc
aagctcatgagtactattggggagatgattgatcatcccaaagcgaaggaacatatggat
gtatattttgaaaggctgagagtattatcaaacaacatgaatttatcttctagggtgagg
tttatgttgaaggatgtaattgatttgagaaggaatagatggcagcaaaggagaaaagtc
gatggtccaaagaagattgaggaggtacacagggatgctgtgcaagagaggcaggctcaa
gctcaagttggtaggatgggtcgtggtatgggaaacaatcaatctgcaagaaggatggat
tttggtgctagaggatcatctatgttgtctcctcctgctcagatgggtggaccgcgtggg
ctgcctacacaagcacggggatatggtttacaggatgctcgttttgaagaaaggcaatct
tatgagcctaggcccttgtcagttaatttccctcaaagacccttgggtaatgattctata
acattggtaccccaaggtggtcttgctaggggaatgtccattagaggatcaacagcttct
catttgtcaatacctgatgtgcattctagccacggagaccctcacagaatggcaggaggt
attaatggttatagtaattcatctgagcgcacaccgtacggctcaagggaggatcttgca
tcaagatatatttcagacagatcttcaagtctagctggatatgatcattcaagtgctcca
gggcataatataaactatggtaacagagacttaaggaatgatgatcggaatctcgacagg
cctgttacaactccacctcacactcagttgcaagggccaattgtctcccaaaatgcttct
tcagagaatgcttggccagaggaacaactacggaacatgtccttgtcaacaatcagagaa
tactacagtgctagagatgtaaatgaagttgctcaatgcatcagagatttgaactctcca
gcctttcacccttccatggtttctgtatgggtcttggactcatatgagagaaaggacact
gaaagagatcttttagccaaactgcttgtcaaacttgggaaatctcaggatggcctatta
agtcaaactcagcttaacgaagggttcgtgaaagttctcagtaatttggaggatgatgtt
aatgatgcccctaaggcaccagagtttcttggctgtatttttgcagaacttataatagag
agtatagtcagtttgaatgagattggccaagtaatacatgatggtggagacccgccaggc
agtctcttagaagttggacttgcagctgacgtcctcggaagcaccttggaggcaataaaa
catgagaaaggcgacactgttctaagtgagattcaaacaggctcaaacttgcggttggag
actttccgaccacctaatacttctactacatcaaggaagttggagaagtttatttag
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integrated database retrieval system
