Trifolium pratense (red clover): 123887145
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Entry
123887145 CDS
T08949
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123887145
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123887145
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123887145
NCBI-ProteinID:
XP_045792388
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Position
LG5:53040393..53042477
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AA seq
446 aa
AA seq
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MEANKLRLLFFCVCYLAIFPTFEANIAHFDPYWQSRSHEAKKAAHKAYKPNPVNETANFN
MQVHKAFEVSHGTRRSLLNHRKRGPCEATNPIDSCWRCDPHWEKNRKRLADCVIGFGHGT
TGGKDGRFYVVTDPSDNDLVNPKPGTLRHAAIQTEPLWIIFQHHMNIKLKSELMLTDNKT
IDGRGVNVHISGGAQITMQYVKNIIIHGLHVHDTKPCSGGLIRDSLSHFGQRSMSDGDGI
SMFGVSHVWLDHISLWNCSDGLIDAVAGSTAITISNCHMTHHNDVINITSTHYFVMLFGA
SDSFPGDQISQITVAFNHFGKGLIQRMPRCRWGFFHIVNNDYTHWLMYAIGGSTHPTILS
QGNRFIAPPNPNAKEVTKRDYAPESVWKKWSWRSENDLLMNGAFFVQSGTKAANFPKSDI
KAKPGSYAAALTRNAGFLKCEVNKPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaacaaacttagattgctctttttttgtgtatgttatcttgctattttccct
acgttcgaggctaacatagctcacttcgacccttactggcaaagtcgatcacatgaagct
aaaaaggcggcacacaaggcttacaagccaaatcctgtgaatgaaactgctaatttcaat
atgcaagtccacaaggcttttgaagtttcccatggcacaaggaggagtttattaaatcac
agaaaaaggggtccgtgcgaagcaacaaatcccatcgatagttgttggagatgcgatcca
cattgggaaaagaaccgcaaaaggctagcagattgtgttattggttttggtcacggcaca
acaggaggcaaagatggcagattttatgttgtcactgatccatctgacaatgatcttgtc
aacccaaaaccggggactttgcgacatgcagccattcaaaccgagccattatggatcatt
tttcaacatcatatgaatattaaactgaagtcagagcttatgctgaccgataataagacc
atagatggacgcggtgtaaacgttcatattagtggtggtgctcaaataacaatgcaatat
gtgaaaaacattatcattcacgggttacacgttcatgatactaaaccatgcagtggtggc
ctcatcagagactcgttgagtcactttggacaacgttcgatgagtgatggtgatggaatt
tcaatgtttggagtttctcatgtttggctagatcatatttcattgtggaactgttctgat
ggtttgattgatgccgtagcaggatcaacagctattaccatttccaactgccatatgaca
catcataacgacgtaattaacatcacatctactcactattttgttatgttatttggagca
agtgattcattcccaggagatcaaatttcgcaaataactgtggctttcaaccattttggg
aaaggattgatacagaggatgccaagatgcagatggggtttctttcatattgttaacaat
gactacactcattggcttatgtatgccattggtggtagcacacatcccaccatactcagc
cagggtaaccggtttatcgctcctccaaacccaaatgcaaaagaggtgacaaagagagat
tatgcacctgaaagtgtgtggaagaaatggagttggagatcagagaatgacttgctgatg
aatggagccttctttgttcagtccggaactaaggctgcaaattttcctaagtcagacatc
aaggcaaagcctgggagttatgctgcagctcttactcgcaatgccggttttctaaaatgt
gaagtaaacaagccatgttaa
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