Trifolium pratense (red clover): 123888205
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Entry
123888205 CDS
T08949
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123888205
Membrane trafficking [BR:
tpra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
123888205
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_VPS8
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
123888205
NCBI-ProteinID:
XP_045793131
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All DBs
Position
LG6:complement(21366368..21377600)
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AA seq
1125 aa
AA seq
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MYMTYGWPQVIPLEQGLCPSEQKIVYFKLINRFLLIVSPTHFELWSSSQHRVRLGKYKRD
SDSLQREGENLQAVWSPDAKLIAILTSSSYLHIFKVQFLDKKIHIGGKQPSALCLATISL
LLTEQVPFATKDLSVSNIVSDNRHMLLGLSDGTLYSMSWKGEFYGAFQFDPHPPDSFDDS
HLPHSLENGLSPKGLPKVPMSNHIFPRNSEIKQLELCLPLRLLFVLYSDGQLVSCSISKK
GLKQVDGIKAEKRLACGDAVCASVALEQEILAVGTRRGIVELYDLAESTVLIRSVSLYDW
GYSMEDTGPVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSVSSPIAKP
NHDCKYEPLMGGTSLMQWDEHGYRLYAIEERSSERILSFSFGKCCLSRGVSSTAFIRQVI
YGEDRLLIVQSEEIDELKMLHLKLPVSYISQNWPVQHVAASQDGMYLAVAGLHGLILYDI
RLKRWRVFGDVTQEQKIQCKGLLWLGKIVVVCNYIDSSNTYELLFYPRYHLDQSSLLCRK
PLLAKPIVMDVYQDYILVTYRPFDVHIFHVKLFGELTPAGNPDLQLSAVRELSIMTAKSH
PAAMRFIPDQLPREPISKNYISSSSDSLTGEPARCLILRSNGELSLLDLDDGRERNLTDS
VELFWVTCGQSEDKTNLIEEVSWLDYGHRGMQVWYPSPGPNSFKQEDFLQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRMSFPSSAEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALRL
AELSAEKPHFSHCLEWLLFTVFEADISRPNVNKNQTSVLKPSKTLLEKTCDLIRNFPEYL
DVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYC
ALRLLQATLVDSLYELAGELVRFLLRSGREYDQASADSDNSDKMSPRFLGYFLFRSTEHK
QALDKSASFKEQSAHVTSVKNILENHASYLMAGKELSKLVAFVKGTQFDLVEYLQRERNG
SARLENFAAGLELISQKLQMETLQSRLDADFLLAHMCSVKFKEWIVVLATLLRRSEVLFD
LFRHDFRLWKAYSSTLQSHPAFIEYQDLLEDLEEKLSSVANEEEK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgacatatggatggcctcaggtcatccctttagagcaaggactgtgtccttct
gaacagaagattgtttatttcaaactcatcaatcgtttcttgttaattgtttcccccact
cactttgaactatggagctcttcccagcatagagtgagattggggaagtacaagagggat
tcagattcattgcagagagaaggagaaaacttgcaggctgtgtggagtcctgatgctaaa
ttaattgctattcttacatcttcttcgtatcttcacattttcaaggtccaattcttggac
aaaaaaatacacattggtgggaaacaaccttcagcgttgtgcctagctactatatctctt
cttctcactgagcaagttcctttcgcaacaaaggatttgtcagtgagcaatattgttagt
gataacaggcacatgctgcttggactttccgatggaactttgtacagtatgtcttggaag
ggggagttttatggagcttttcaatttgatccacatcctcctgatagctttgacgattct
catttaccacattctttagagaatggtctttctcctaaaggcctcccaaaagttcctatg
tccaatcacatatttcccagaaattctgaaatcaaacagctggaactttgccttccattg
aggttgctatttgtcttgtattccgatgggcaacttgtctcatgttccataagtaagaaa
ggtttaaagcaagttgacggtattaaagcagaaaagaggttggcttgtggggatgctgta
tgtgcttcggtagctcttgagcaggaaattcttgctgttggtaccagaagaggaatagtg
gagttgtatgatttggccgaatcaacagtgcttatacgctcggtttctttgtatgactgg
ggatattcaatggaagacactggccctgttagttgcattgcatggacacctgataattct
gcttttgcagttgggtggaaattaagggggcttacagtttggtctgtttctgggtgtcgt
ttgatgtcaacaatccgacaaataggtttaagttctgtatcttctccaattgctaagcca
aaccacgattgtaagtatgagccattgatgggtggtacctcactgatgcagtgggatgaa
cacggatatcgactttatgctatcgaggagagatcttcagagagaattctttcattctct
tttggaaaatgctgtcttagcagaggtgtttctagcactgcattcatccggcaagtgatt
tatggggaagaccggttgctcattgtgcagtcagaagaaattgacgagcttaaaatgctg
catcttaagcttccagtttcttatatttcccaaaactggcctgttcaacatgtggcagct
agtcaagatggaatgtacttagctgttgctggtcttcatggtttgatattgtatgatata
cgactgaaaagatggagagtatttggagatgttacccaggaacaaaagattcagtgtaag
ggcttgctatggctgggaaagattgtcgttgtctgcaactatattgattcttccaacacg
tatgaattgctcttttacccaaggtatcaccttgatcaaagctcattgctttgtcgaaaa
ccattgcttgcgaaaccgatcgtgatggatgtgtaccaagattatatactggttacatat
agaccatttgatgtccatatattccatgtgaagttatttggtgaattaactcctgctgga
aatccagatttacagctttctgcagtacgagaactttcaattatgactgccaagagccat
cctgcagcaatgcgattcattcccgatcaactcccacgagaacctatttcaaaaaattac
atttcatcttcatcagattcattaacaggagaaccagcaagatgtttgatattgagatca
aatggggagctttcacttcttgatttggatgatggccgggaaagaaatcttaccgattca
gttgagcttttttgggtcacttgtggccagtctgaggataaaacaaatttgattgaggaa
gtttcatggttagattatggtcatcgaggcatgcaggtttggtatccatctccaggtcct
aattcttttaagcaggaggatttcttgcagttggatccggagctggagttcgatcgtgaa
gtatacccattgggacttcttccgaatgctggtgtagttgttggtgtttcccagagaatg
tcatttccatcaagtgcagagttcccatgttttgagccatctcctcaagcacaaactata
ctgcactgcctactccgccatcttcttcagagggacaaaattgaggaagctttaaggctg
gcagaactatcagcagaaaagcctcatttttcgcattgtctagagtggcttctgtttaca
gtatttgaagcagatatatccaggccaaacgtaaataagaaccagacctcagttcttaaa
ccttcaaaaactcttttggagaagacctgtgatcttatccgaaattttccagagtaccta
gatgttgttgtaagtgttgcaagaaaaacagatggtcgtcattgggcagatttgttctct
gctgctggaagatcaacagaattgtttgaggaatgttttcaacgtagatggtaccgaact
gcagcttgctatatacttgttattgccaaacttgagggtcctgctgtgagtcagtactgt
gctttacggttattacaggcaacactcgttgattctttatatgagcttgctggggagctg
gtgagattcttgttaagatcaggaagggagtatgaccaagcatcagccgattcagataat
tcagataaaatgtctcccagatttttaggctattttctttttcgttctactgagcacaaa
caagcattggataaaagcgcctcattcaaggaacaaagtgcccatgtcacctcagttaag
aatattttagaaaaccatgctagttacttgatggctgggaaagagctctctaagcttgtt
gcatttgtaaaaggcactcagtttgatttagtggaatatctacaacgcgaaagaaatggc
agtgctaggctggagaatttcgctgcagggcttgaactcataagccaaaagcttcaaatg
gaaacattacagagccgattggatgccgactttctcctggctcatatgtgctctgtcaaa
tttaaggaatggatagttgtcctggctactctcttaagacgctccgaggttctttttgac
ttattccgtcatgactttcggttatggaaagcttacagcagcaccctgcagtcacaccca
gcattcattgaatatcaagatttattggaagacctggaagagaaactttcatctgttgca
aatgaggaagaaaaatga
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