KEGG   Trifolium pratense (red clover): 123888361
Entry
123888361         CDS       T08949                                 
Name
(RefSeq) uncharacterized protein LOC123888361
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123888361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123888361
   03041 Spliceosome [BR:tpra03041]
    123888361
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     123888361
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123888361
Spliceosome [BR:tpra03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    123888361
SSDB
Motif
Pfam: RRM_1 Cut8 RBD_DEAH11 PCAF_N
Other DBs
NCBI-GeneID: 123888361
NCBI-ProteinID: XP_045793355
LinkDB
Position
LG6:complement(16573303..16585053)
AA seq 419 aa
MNEVGVLPTVNRWDEPIALGIVDPHDSLSHPAGVSDVQTESATRVDPDQFTNFVIPNWLG
GESTGSTKDNPFTLPEAYMASQQRNEKNLGEIKYLSFINVEVEMEMVMSKKKEMEDLENN
NGDFVSNEEIRIFIESLTKPQLVDLLSQLGSKYPSIAQEIESFANVDRARRKLNAFQVHG
KSTQSAPRKSTQSASSAPNKFVRGVCMLDDETRRIRSAPDLFERNLFIENLSPQVTWEML
LDYFERHGDILECLLVCQRHAGSKVSSYSGIVTYKTAEAAKKAIDDLDQTTLGGRTITVK
YFDTLYGGGQPSVPARVAPMAALHMSPEYVEGYTYPRPGAPYAAPRYPYPQTGAPFAASP
YPYPRTDPPYAVSPYPYPRTDAPHGAPPYPYPRTAARFALPPYPYPQTDAPSYAASRYP
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatgaagttggagttctgcccacagtgaatcgttgggatgaacctatagcattggga
atagttgatccccatgattcactatctcatccagcaggtgtctccgatgttcaaactgag
tctgctactagggtggaccctgatcagttcactaattttgtgattccaaactggcttgga
ggagagtccaccggttctacaaaagacaacccattcacattaccagaggcttatatggca
tctcagcaaagaaatgaaaagaatctaggggagataaagtatttgtctttcattaatgtc
gaggtggagatggaaatggtgatgagtaagaagaaagaaatggaggatttggaaaacaac
aatggtgactttgtttccaatgaagaaattagaattttcattgaatctcttaccaaacct
caactcgttgatcttctctctcaactagggtccaaatatccttcaattgcacaagaaata
gaaagttttgcaaatgttgatcgtgctcgtcgaaagcttaatgcatttcaagtgcatgga
aaatcgactcagagtgcaccacgaaaatcgactcagagtgcatcgagtgcaccaaacaag
tttgttcgtggagtatgtatgttagatgatgagaccagaagaatcagaagtgctcctgat
cttttcgagagaaatctttttattgaaaacttatcaccacaagtaacatgggaaatgctg
ctcgactattttgagaggcatggtgatatattggaatgtttacttgtatgtcaacgtcac
gcgggttcaaaggtatcaagttattctggcatcgttacatacaagacagcagaggcagca
aagaaagcgatagatgacctagatcaaacgactcttgggggaagaactataactgtaaaa
tattttgatacattatatggaggtggtcagccgtctgttcctgcaagagtagctccaatg
gcagccttacatatgtctccagaatatgttgagggttacacatacccccgacctggtgca
ccatatgccgcaccacgttatccatacccccaaacaggtgcaccatttgctgcgtctcct
tatccatacccccgaactgatccaccatatgccgtgtctccttatccatacccccgaact
gatgcaccacatggtgcaccaccttatccatacccgcgaactgctgcaagatttgcttta
cctccttatccatacccccaaaccgatgcaccatcatatgccgcgtctcgttatccatga

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