KEGG   Trifolium pratense (red clover): 123888381
Entry
123888381         CDS       T08949                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03020  RNA polymerase
tpra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123888381
  09124 Replication and repair
   03420 Nucleotide excision repair
    123888381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpra03021]
    123888381
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123888381
Transcription machinery [BR:tpra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     123888381
  RNA polymerase III system
   RNA polymerase III
     123888381
  RNA polymerase I system
   RNA polymerase I
     123888381
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123888381
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 123888381
NCBI-ProteinID: XP_045793380
LinkDB
Position
LG6:16791318..16794644
AA seq 171 aa
MADDDYEDIDMGYEEEPPEPEIEVHFFFFWNFYFLEFNGFIDGFNQIIGVQEGAEEEDPD
KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG
ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
NT seq 516 nt   +upstreamnt  +downstreamnt
atggccgacgatgactatgaggatatcgacatggggtacgaggaggagccaccagagcct
gagattgaggttcattttttttttttttggaatttttattttttggaatttaatggattt
attgatgggtttaatcaaattattggtgtgcaggaaggtgcagaggaggaagatcccgat
aaacaaaatgatgacttggatgctgaaccgattgaaactgaagataaggaagctgatcaa
ccagttgagcgtcccagaaggacttctaaatatatgactaagtatgagcgtgctaggatt
ctcggcacccgtgctcttcaaatcagtatgaatgcacctgtcatggttgagttggagggg
gaaactgacccacttgagattgccatgaaggagctacgagagcggaaaattccttttacc
atccgtcgctacttgcctgatggaagttatgaagattggggagttgatgaactgattgtg
gaagactcttggaagagacaagtgggtggtgattga

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