Trifolium pratense (red clover): 123888385
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Entry
123888385 CDS
T08949
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123888385
Enzymes [BR:
tpra01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
123888385
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
123888385
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
123888385
NCBI-ProteinID:
XP_045793393
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All DBs
Position
LG6:complement(16814167..16816326)
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AA seq
244 aa
AA seq
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MAPRWKGKDAKSKKDAEAEALREPMSMIISQLQSSLVQSNTCGFLSDNCVHLAVQAEQLD
LLDKSCFGRPVRTVEKDMYWFQLTLEEAFYLCYFLKCLKINGGADTGPSNDEQLWRYFKS
KKEAFPCFYKAYSHLRMKNWVVRSGAQYGVDFIVYRHHPARVHSEYGVLVLSHDNDDDPN
GRLRVWSDVHCSTRLLGSVAKTLLVLYINKNGHSDESPLCLANYTIEERTISRWSPEQCR
ERSI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaagatggaaaggaaaagatgcaaaatcaaaaaaggatgcagaagccgaggca
cttagagaacccatgtcaatgattatatcacaacttcagtcttctttagttcaatcaaat
acttgtggatttctctctgataattgtgtacacttagcagtgcaagcagaacaacttgac
ctgcttgataaatcatgctttggtcgacctgtgagaacagttgaaaaggacatgtactgg
tttcaattaaccttggaggaagcattctacctatgttatttcttgaaatgcctcaagatt
aatggtggtgctgacactggtccctcaaatgatgaacaactgtggcgttacttcaagtcc
aagaaagaagcattcccttgcttttacaaggcttattctcaccttcgaatgaaaaattgg
gtagtgaggtcaggggctcagtatggtgtagacttcattgtctatcgccatcatccggca
cgggtgcattctgagtacggtgtacttgttctatcacatgacaatgatgatgatccaaat
ggaagattaagagtatggtctgatgttcattgctcaactcgacttctaggaagtgttgca
aaaaccttattagttttgtacattaataaaaatggtcacagtgatgagtctccattatgt
ttggcaaactataccattgaagaacgtacaatctccagatggagtccagaacaatgccgt
gaaagatccatatag
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