Trifolium pratense (red clover): 123888417
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Entry
123888417 CDS
T08949
Name
(RefSeq) mRNA-capping enzyme
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123888417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123888417
Enzymes [BR:
tpra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
123888417
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
123888417
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
123888417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
DSPc
mRNA_cap_C
DNA_ligase_A_M
Tc-R-P
Y_phosphatase
PTP-SAK
PTP-NADK
Y_phosphatase2
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
123888417
NCBI-ProteinID:
XP_045793433
LinkDB
All DBs
Position
LG6:25509311..25520111
Genome browser
AA seq
690 aa
AA seq
DB search
MMFSMDLNASPVPEEDEDPFEGQVEEYNAPPKEVYIAPEEHIESGADIARREREERKKRL
KIERSDDRPVQISHAPGYDNFFHNKILKSYDRSKLPPGWLNCPSFGQEIVGMIPSKVPLG
EAFNDYIVPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCE
GRGSVPDNSSVNHFVFEVIQFLSHQKHSKKYILVHCTHGHNRTGYMIIHYLMRTMSMSVT
QAIKIFSDARPPGIYKPEYIDSLYKFYHEKKTEMIVCPPTPEWKRTPQLVDLNGEAAPDD
DDNDDDGVPGPPLHENHEIDAIMTNDDVLGDEIPNDQQYAFRQFCFQILKLGVGARGNMQ
FPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNFRRVQMRFPC
RVINDGLAEKTHHFTLLDGEMIIDTLPDSKKQERRYLIYDLMAVNLVSVIERPFCERWKM
LEKEVIEPRNQERYQGKNPYYRYDMEPFRVRRKDFWLLSTVTRLLNEFIPKLSHDADGLI
FQGWDDPYVPRTHEGLLKWKYADLNSVDFLFEIDDDRQLLFLYERGKKKLMEGYIVAFEE
GSDPLLYSGKIIECAWDGDRNEWIFKRVRTDKSTPNDINTYKKVMRSIRDNITEDVLLTE
INEIIRLPMYADRIRNDSKGHHHNNMARRR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttctatggacttgaatgcctctcctgtgccggaggaagatgaagatcctttt
gagggccaggtagaagagtataatgcgccgccaaaagaagtgtatattgcgccagaagaa
cacatagaaagtggagctgatatagcgcgccgggaacgtgaagaaagaaagaaacggttg
aaaatagaacgttcagatgacaggcccgtgcaaatatcacatgcacctggatatgataat
tttttccataataagatccttaaatcatatgatagaagtaagcttcctccgggttggttg
aattgcccttcatttggccaggaaatcgttggcatgataccttctaaggttccattgggt
gaagctttcaatgactatattgttcccggtaaaagatactcatttaaacaagtgatacat
caacagagagttttagggagaaaacttggtctggtcattgatttgacaaatacttctaga
tactatccagtatcagatctaaagaaagagggtatcaagcatgttaagatccaatgcgag
ggccgcggttcagtacctgataattcatctgttaatcattttgtgtttgaggttatacaa
tttttatcacatcaaaaacactcaaagaagtatatacttgttcattgtacacatggtcat
aatcgtacaggatatatgatcatccattatctaatgcgcacgatgtcaatgtctgttact
caggcaataaaaatattttctgatgcacgtcctccgggaatctataaacctgagtatatt
gattcattatataaattctatcatgaaaagaagactgaaatgatagtttgtcctcctact
cctgagtggaagagaactccccaactcgtggatctcaatggtgaagcagctccagatgac
gacgataacgatgatgatggagtaccaggtcctccgttgcacgagaaccacgagattgac
gcaataatgacaaatgatgatgttttgggagatgagatacctaatgatcagcaatatgca
tttcggcagttctgctttcagatactcaaattgggggttggggccagaggaaacatgcaa
tttccagggtcgcacccagtttctttaaacagggataatttacagctgttgcgacagcgt
tattactatgcaacatggaaagctgatggaacaagatatatgatgctaataactatggat
ggatgctacttgattgataggaacttcaattttagaagggttcaaatgaggtttccatgc
agggttataaatgatggcttggcagagaagactcaccacttcacattgcttgatggggag
atgattattgatacattgccagattcaaaaaagcaggaaaggagatacctaatatatgat
ctgatggcagtcaaccttgtttcagtgatagagcgacctttctgtgaacggtggaagatg
cttgagaaagaagtaattgaacccaggaatcaggaacggtaccaaggcaaaaatccttac
tatagatatgacatggagcctttcagggtgaggaggaaagatttctggttgctctctact
gtcacaagacttttgaatgaattcattccgaaactctcacatgatgcagatggtctcata
tttcagggatgggacgatccttatgtacctcgcactcatgaaggtctcttaaagtggaaa
tatgctgatctgaattcagttgattttctctttgagattgatgatgatcgtcagcttctt
tttctctatgaacgtggaaaaaagaaactcatggaagggtatattgttgctttcgaagaa
ggttcagaccccttgctttattctggaaagattattgagtgtgcttgggatggtgataga
aacgaatggatattcaagcgagtcagaacagacaagtcaactcccaatgacatcaatact
tacaagaaggtgatgcgaagtataagagataatatcacggaggatgtcctattgactgaa
ataaacgagataatccgccttcccatgtatgccgacaggataagaaatgatagcaaagga
catcaccacaataatatggctaggcgaaggtag
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