Trifolium pratense (red clover): 123888422
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Entry
123888422 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123888422
04131 Membrane trafficking [BR:
tpra04131
]
123888422
04121 Ubiquitin system [BR:
tpra04121
]
123888422
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123888422
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
123888422
Membrane trafficking [BR:
tpra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
123888422
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123888422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
123888422
NCBI-ProteinID:
XP_045793441
LinkDB
All DBs
Position
LG6:complement(25622924..25627526)
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AA seq
437 aa
AA seq
DB search
MLQIRLSKNPSSDGSAGVKHSPVETVTVACPDHLVLADLPVAKGIGTATGSSVVRNVGRR
SRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDERIQKIQTVKVME
GILVCAAPHCLKTFFKRAEFESHIHEYHADLVPSNPDKEDGNESEAQSVRQPTASDSTVR
GPQRQVFSPGSNSQPHDLEDRTRRQPVRDQTPSRPTMQQKPPFFGQQHHSSDTMSGSVGG
MQHGIHQQSFDMQQHPPQEPSQFTDRQQSVGPDNSFPEYPILHPAQPANAPLHSNPMLNP
PAPFGYPPYPQDRSQPFYAAAPYDNMPRQDSASDIGGDPNSLMGFPQGVPNGPNFQGNYP
QPWNVAGVPFEQAQSGGMVVDPRDAKGILAPQPMALPPPPPPPAHMMKQNYYSGEHGHDG
QGYGWQHDNRDSFNGQG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagattcgtcttagcaagaatccttcatctgatggatcggcaggagtgaagcat
tcacctgtcgaaactgttacggttgcgtgccctgaccatttagttcttgctgatcttcct
gttgcaaagggcattggtacagctactggttcatctgttgttaggaatgtaggtcggaga
tctcgacgtcaacttggtgagcgagttcatttttgtgttcgctgtgatttcccgattgct
atttatggacggctgagcccttgtgagcatgctttctgtctcgattgtgctagaagtgat
tcattatgctacctatgtgatgaacgaatccagaagattcagacagtcaaagtgatggaa
ggaatcctagtatgtgcagctcctcattgtctcaagacattcttcaagagagctgaattt
gaatctcatatccatgaataccacgctgatcttgttccctccaatccagataaagaagac
ggaaatgagtcagaggcacaaagtgttagacaacctacagcctcagactccactgttcga
ggccctcaaaggcaagttttttcaccaggttcaaattctcaaccccatgatctggaagac
agaacccgtcggcaaccagtaagagatcaaactccttcaaggccaacaatgcagcaaaag
ccgccatttttcggccagcaacatcactcctcagataccatgtctggttctgttggaggt
atgcaacatggaattcatcaacaaagttttgacatgcagcagcatcccccacaagaacct
tcccagtttaccgacaggcagcaatctgttggtccagataactcatttcctgagtatcca
atactgcaccctgcacaacccgccaatgcccccctgcactcaaacccaatgctgaaccca
cccgcaccatttggttatcccccttacccacaagaccgatcccaaccattttatgctgct
gcaccctatgataatatgcccaggcaggactcagcttctgatataggtggggacccaaat
tcattaatgggtttccctcaaggtgtcccaaatggcccaaattttcaaggaaattatccc
caaccctggaatgtggcaggtgttccttttgaacaagcacaaagtggtggcatggttgtg
gatccaagggatgccaaaggtatactggcaccacaacccatggccctcccaccaccacca
ccgccaccagcacacatgatgaaacagaactactattctggtgagcatggacatgatggt
caaggttatggctggcagcatgataaccgtgacagctttaatggtcaaggctaa
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