Trifolium pratense (red clover): 123888536
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Entry
123888536 CDS
T08949
Name
(RefSeq) LIMR family protein At5g01460-like
KO
K14617
LMBR1 domain-containing protein 1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
123888536
04980 Cobalamin transport and metabolism
123888536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123888536
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
123888536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
TMEM237
CCSMST1
Uso1_p115_C
FapA
Motif
Other DBs
NCBI-GeneID:
123888536
NCBI-ProteinID:
XP_045793570
LinkDB
All DBs
Position
LG6:complement(21117627..21123672)
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AA seq
509 aa
AA seq
DB search
MGDFNLALVIVAIVVVAIVFLVNVYLLVNYQHPDDVNQAYFPKFVVVFGLSIAAISILML
PADVANRQACRHAIYNGACNLTLPMKDLWLAVYVIDAILVFFVIPFAMFYYEGDQDKSIG
KRVKSALWWVVSTAIVCALVLGILYGLVGKVDFTVRHLSSSTTSFPNSWVFNSGQQCIGN
GVHQCSAYSASPSSEKTWTMRSTFPEYVVALATIVGSVLFSIFGGVGIACLPLGLIFSFI
RRPKAVITRSQYIKEATELGKKAKELKKAAESLHQDERSGAKGRKHRKNVKEVEKELFQL
EEDVKLLEEMYPQGEKAETTWALTVLGYLANLVFGILGLIVSVAWIAHIIIYLLINPPLS
PFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGATMLGLRLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNIFQIAF
VILAGLTFVYYAAFGWRRKKPSGRFQLST
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctcgccctcgtgatcgtagcaatagtggtggttgcgatcgttttt
ctcgtcaatgtataccttctcgtgaactatcagcatcccgatgatgttaaccaggcttac
tttcctaaatttgttgttgttttcgggctttcaattgccgcaatctctatcctcatgctt
ccggccgatgtggcgaatcggcaagcttgccggcatgctatttataacggagcgtgtaat
ctcacgctcccgatgaaagacttatggctcgctgtttatgtaatcgacgctatccttgta
ttctttgtaattcctttcgcaatgttctactatgaaggcgaccaggacaagagtattggt
aaaagggttaagagtgcattgtggtgggtggtgtcaacggctatagtgtgtgctctcgtt
ctgggtattttgtatgggcttgttggtaaggtggattttactgttaggcatctctcttca
tcgacaacttcatttcctaactcatgggtattcaatagtggtcaacaatgtattggaaat
ggtgtccatcagtgctctgcatactctgctagtccttcttcagagaaaacatggaccatg
cgatcaacctttccagaatatgttgttgctctagctactattgttggatctgtgcttttt
tctatatttggtggtgttggtattgcttgtcttccactaggacttatattttcatttatt
cggcgtccaaaggctgttatcactcgctcacagtatatcaaggaagcaactgaacttggt
aaaaaagcaaaagaattgaagaaagcggccgagtcactccatcaggatgaaagaagtggt
gcaaagggtagaaaacatcgtaaaaatgtaaaagaagtagaaaaggagttgtttcaatta
gaagaagacgttaagcttcttgaagagatgtatccacaaggggaaaaggctgagacaaca
tgggcactaacagttcttggttatctggcaaaccttgttttcggaattctagggctgatt
gtttcagtggcatggattgctcatatcattatctatctattaattaatcctcccctttct
cctttcctgaatgaagttttcatcaagctagatgatatctggggtctgcttggcacagcc
gcatttgcatttttctgcttctaccttctccttgctgtgattgctggtgccacgatgctt
gggttgagactagttttcatcaccatccatcccatgaagtggggagcaactctcatgaac
tcttttctgtttaatgtgggccttatccttctttgttccattagtgtgattcagttttgc
tccacggcgtttgcttactatgctcaagcaactgcagcccaggaaatatttggacacact
ttggagtctcttcgtggaattaaatatttgtacaagtacaatatatttcaaattgcattt
gttattttggctggattgacatttgtgtattatgctgcctttggatggagaagaaaaaag
cctagtggcaggttccaattgtctacatga
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