Trifolium pratense (red clover): 123888581
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Entry
123888581 CDS
T08949
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123888581
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123888581
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
123888581
Protein phosphatases and associated proteins [BR:
tpra01009
]
HAD phosphatases
Fcp/Scp phosphatases
123888581
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123888581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
123888581
NCBI-ProteinID:
XP_045793611
LinkDB
All DBs
Position
LG6:31758626..31765109
Genome browser
AA seq
1229 aa
AA seq
DB search
MVFGSFLDCNNSKNLEEMGKEVEDVEEGEISDTASVEEITEEDFNKPDVVKVNNNNSDKV
KSGSGGGGGGDSRVWAVQDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSD
SNVNANANSNTSSNNDGDLNKPSKEIVVVDDDDKEEGELEEGEIDADDDTDCVMLSGDDF
ETVSEVLGIKAVLEGITVANVAEPFAETCTRIQGVLCSKVFSGLAGSEKDNLVCLSFNAI
KVVYSVFCSMEHSQKEENKDNILRLLSFLKNEHAHLFTPEHIKEIQVMINAIEYVDASGN
SDVIGKEEKLEALDKTQEILGLKASELISSSKLVLDNLTYPSEVFKYGQSNIKSRGVMLP
LFDLHKVHDLDSLPSPTREAPSGFAGNKLFSVGDGVDRFGLPPAVKTEVEKMELDNKDSK
FHNYDTDALKAVSTYQQKFSQSSFFTDDKFPSPTPSGDCEGGVVDTNDEVSSASVTSLLT
SSRPPPLDPMPVSSSSTDKSSMHGLMNSRIDAAVSGSYPVKNSAKSRDPRLRFINSDAST
LDLNQPLRANNMPTVEYPGRVISRKQKTEESSLDATAPKRLRRSLENSEHNTRAERTVAG
KGGWFEESTVAELERTMNTSSGNLTVTSDGNEQAPVTGCSTAASLPVVQNMAVNPTILMN
ILLDQQQRLAAEAQKKPVDSATSILHLTNSNSARGNTGSAMTAGLPQSSVGILPASSPAT
STTQPLQVDSGKIRMKPRDPRRILHGISTLQKSENLGSEQSKAIVSPTPNNQGTGDNVNA
QKLDVRAAAKLAPIQSITQPDITRQFTRNLKNIADIMSVPQEPSTNPLATQNVSSASVPF
TSDRAEQKSSVPNSQNLKDGVGSAPETCASGSSRPQNTWADVEHLFEGYDEKQKAAIQRE
RTRRLDEQNKMFAAKKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPQRHLF
RFPHMGMWTKLRPGVWNFLEKASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR
GDDAETVDTKSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLP
GPSLLEIDHDERPDTGTLASSLGVIERIHHNFFASESLEEVDVRNILASEQRKILDGCRI
VFSRVFPVGEANPHLHPLWQTAEQFGASCTNQIDDQVTHVVANSLGTDKVNWAMANGKFV
VYPSWVEASALLYRRANEQDFAIKSEKTT
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggtttttggatcgtttttggattgtaataattcgaaaaacttggaagagatggggaaa
gaggttgaggatgtggaagagggtgagatttctgatactgcttctgttgaagagattact
gaagaggatttcaataaaccagatgttgttaaggtgaataataataatagtgataaggtt
aaaagtggcagtggtggtggtggtggtggtgattctagggtttgggctgttcaggatttg
tattcaaagtatcctactatatgtcgtggttatgcttcgggattgtataatcttgcttgg
gcacaagctgttcagaataagcctttgaatgatatttttgtaatggaacttgattctgat
tctaatgttaatgctaatgctaatagtaacactagcagtaacaatgatggtgatttgaat
aagccatcaaaggagattgtggtggtggatgatgacgataaagaggaaggggaattggag
gagggggagattgatgctgatgatgatacagactgtgttatgttgagtggtgatgatttt
gagactgtttctgaggtgcttggtattaaggctgttttggagggtattactgttgctaat
gtggctgaaccgtttgctgaaacttgtactaggattcagggtgtcttgtgcagcaaagtg
ttctctggacttgctggttctgaaaaagataatcttgtctgtttgtcattcaatgcaatt
aaagtggtttattctgtgttctgctccatggagcattcacaaaaggaagagaataaggat
aatatattaagattgctttcttttctgaagaatgaacatgctcatttatttactccggag
catatcaaagagattcaggtcatgattaatgcaattgagtatgttgatgcttcgggcaat
agtgatgttattggcaaggaggaaaaattggaggcccttgataaaactcaggaaattcta
ggtttaaaagctagtgaattgatttcttctagtaagcttgtccttgataacttgacatat
ccatctgaagtctttaaatatggacaaagtaatattaaaagcagaggagttatgctccct
ctgtttgacctacataaggtccatgatttagacagtttaccgtcacccacacgagaagct
ccatccggcttcgctgggaataaattgttttcggtgggagatggggttgatagatttggg
ttgcctcctgctgttaagacagaggttgagaagatggaactggacaataaagattctaag
tttcacaactatgataccgatgctttgaaagctgtttcaacatatcaacaaaagtttagt
caaagttctttttttactgatgataagtttccaagcccaactccttcaggtgactgtgag
ggaggggttgttgataccaatgatgaggtctctagcgcttctgtaacttctttgctaaca
agctccaggccaccccccttggatccgatgcctgtttcttcttcttccaccgataagtca
agcatgcatggattaatgaattctagaattgatgcagcagtttctgggtcttacccagtg
aaaaattcagcaaagagtagggatcctaggcttcgtttcattaattctgatgcaagtact
ttagatcttaaccagcctttacgggcaaataacatgcctacagtggaatatcctggaaga
gtaatctcaagaaagcaaaaaactgaagagtcttcattggatgctactgctcccaaaaga
cttagaaggtctttggaaaactccgagcacaataccagagcggaaagaactgtggccgga
aaaggtggttggtttgaagaaagtacggtggctgaactcgaaaggactatgaataccagt
tctggtaatctgaccgtgacaagtgatggaaatgagcaggcacctgttacaggttgcagc
accgcagcttctttacctgttgtacaaaatatggctgtaaatccaaccattttaatgaat
atacttttagaccaacagcagagattagcagcagaagcccaaaagaaacctgttgattct
gccacaagtatattgcatttaacaaactcaaattcagcaagggggaatactggttcagca
atgactgctggtcttccgcaaagttctgttggaattcttccagcttcatcaccagcaact
tccacgacacaacccctacaagtggattctggaaaaattcgcatgaaaccccgggaccca
cgtcgcattctccatggaattagtactctccagaagagtgagaatttggggagtgaacaa
tccaaagcaattgtatcccctacgccaaataaccagggaactggggacaatgtcaatgcc
cagaagcttgatgttagggctgcggcaaagttggcacctattcagtcaattacacaacct
gatattactcgacagtttaccaggaatctgaaaaacattgctgatattatgtctgttccc
caagaaccatcaactaaccctcttgctactcaaaatgtttcctctgcatctgttcccttt
acatcagatagggctgagcagaaatccagcgttcctaactctcagaacctgaaagatggc
gtaggatcagctcctgaaacatgtgcatcaggttcctctcgaccccagaatacttgggct
gatgttgagcacctttttgaaggttacgatgagaagcagaaagctgccatacaaagagag
agaactaggaggcttgatgaacagaataaaatgtttgctgctaagaagctgtgccttgtg
ttggacctagaccatacacttcttaattctgctaagtttgtggaagttgatcctgtgcat
gatgagatattgagaaagaaagaagaacaagaccgtgagaagcctcaaagacatcttttt
cgttttcctcatatgggaatgtggactaaactcagacctggagtctggaacttccttgag
aaagctagtaaactctttgagatgcatctttacactatgggaaacaagctatatgctaca
gaaatggcaaaggtgcttgatccaaagggagtattgtttgctggtagagttatttctaga
ggtgatgacgctgaaacagttgatactaaaagcaaagatttggaaggcgttttgggtatg
gaatcatctgttgtaattatagatgattctgtgagagtctggcctcataacaaactgaac
cttatagtggtggaaaggtacacatacttcccttgtagcagacgtcaatttgggcttcct
ggcccttctcttcttgagattgatcacgatgagagacctgatactggaactttggcatcc
tctttgggggttattgagagaatacaccacaacttttttgcttctgaatccttagaagaa
gtggatgttagaaatatcctagcttcagaacaaaggaaaattttggatggttgtcgtata
gtatttagtagggtttttcctgttggcgaagccaatccccaccttcatccattgtggcag
acagctgaacaatttggtgcttcttgcacaaaccaaattgatgatcaggttactcatgta
gttgccaactcccttgggactgataaggtgaattgggctatggccaatggaaagtttgtt
gtttatcctagctgggtggaagcatcagcattgctttataggagggcgaatgagcaagat
tttgccattaaatctgaaaaaaccacctaa
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