Trifolium pratense (red clover): 123888638
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Entry
123888638 CDS
T08949
Name
(RefSeq) peroxisome biogenesis protein 6 isoform X1
KO
K13339
peroxin-6
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123888638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123888638
Membrane trafficking [BR:
tpra04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
123888638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
AAA_22
AAA_lid_3
RuvB_N
DUF815
nSTAND3
RNA_helicase
AAA_18
AAA_17
Rad17
TsaE
AAA_7
AAA_28
NPHP3_N
AAA_14
AAA_33
Parvo_NS1
TIP49
ATPase
Mg_chelatase
AAA_25
AAA_6
IstB_IS21
Vps4_C
AAA_24
PhoH
AAA_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
123888638
NCBI-ProteinID:
XP_045793696
LinkDB
All DBs
Position
LG6:complement(14654614..14661447)
Genome browser
AA seq
952 aa
AA seq
DB search
MVERRRKPLVLCSTKNIINSVLKKSSTNEFPNLHLPVGILRFSNNLPSSFHDDDSALIAL
STSLLKTLSITSGSPVMVKNAEMNTQRIAVAIALDPPGSDTPTLDIDHSPSSSSRIMLVF
PSCDFPLSCPLLNAEIAYLSPLLAFNLNLHISCLKSIIRNGQDALSSYFKPQCQVGDEDA
AKSIEDSVINIELEPLAEPPRFASLLRVAFVKIPECGVLDSIKPTSDVESKERQEMIDLA
LQKYFEVDRYLSSRDIFRINISWNCNSTICIPCNHKIQNKSDNFICFKVCLPLPSYIFKF
CETVSGSLLGSNLYLQVIAMEPSDEPVLRVNKTLTALVLVGSSPSALPPDLLIAGPEGTV
PLQRDTVKTLASILAPTLCPTALSSKFRVSVLLYGLAGCGKRTVVRYVARRLGLHVVEYN
CHDLMGSERTSVALAQVFKTAQRYSPTILLLRHFEVFQDSQSPEVSQNDQRGNTSEVASV
IRKFTEPVGEHGDSNSLVKSNGEFVEKTSEKTSGHQVLLIAAADSLEGLPSTIRRCFSHE
ISMGPLTEEQRAEMLLHSLQNVYGLHSNTDLEGFVKEIVGQTSGFMPRDMCALIADAGAS
LFPRSNAEVDKDEPEDTDSSLSSKVTEDNNQSKVSALKPGKEDLVNALERSKKRNASALG
TPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLA
KAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGA
SGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN
SDASYRERVLKALTRKFKLHEDVSLYDIAKKCPPNFTGADMYALCADAWFLAAKRKVLNA
DPESSNPDNEADSIVVEYDDFFQVLEELQPSLSTAELKKYELLRDQFEGTSK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggtggagagaagaagaaaacctctggttctgtgttcaacgaaaaatatcatcaattcg
gtattgaagaaatcttcaactaatgaattccctaacttgcatttaccggttggaattctc
cgattttccaacaatttgccttcttcttttcacgacgacgactctgcactcattgctctc
tccacttctcttctcaaaacactttccatcacttctggttctccggttatggtcaagaat
gctgaaatgaacacacaaagaattgcagtggctattgctctagaccctcctggcagtgac
acccctacccttgatatagatcactcaccatcctcttcttctagaataatgcttgtgttt
ccttcctgtgatttccctttaagctgccccttgttaaatgctgaaattgcgtatttgtct
cctcttttggcctttaatcttaacttgcacatttcatgtttgaaatctattattcgcaat
ggtcaagatgctttgtcgtcttatttcaaacctcaatgccaagtgggtgatgaagatgca
gctaaaagcattgaagattctgtcattaatatcgagttggagcctctggctgaacctccc
agatttgcctcccttctgagggttgcttttgtcaagataccagaatgtggcgtccttgat
tccattaaaccaacttcagatgttgaatccaaagaacgtcaagagatgattgacttggct
ttgcagaagtactttgaagtcgatagatatttgtcaagtagagatattttcagaattaac
attagttggaattgtaattccactatttgcattccttgtaaccacaaaatacaaaacaaa
agtgacaactttatctgttttaaggtatgtttacctcttccctcttatatttttaagttt
tgtgaaactgtgtcaggttctttgttaggcagtaacttataccttcaggtcattgctatg
gaaccatcagatgaaccagttcttcgtgtcaataaaaccttaactgctttggtgttagta
gggagttccccatctgcccttcctccggatttgctaattgctggaccagaagggactgtg
cctttgcaaagggacacagtgaagaccttggcttcaatactagcaccaacattatgtcca
actgcactttcttccaagtttagagtttcagtgttattgtatggcttggcaggttgtggg
aaaaggactgttgttagatatgttgctcgacgactaggcttgcatgtggtggaatataac
tgtcatgatctaatgggctccgagagaacatctgttgctctcgctcaagttttcaagact
gctcaaagatactcgccaacaatacttcttcttcgtcattttgaggttttccaagattca
caatcacccgaggtttcacaaaatgatcaaagaggcaatacatctgaagttgcatcagtc
attaggaaattcactgagccagttggcgaacatggtgatagtaactccttggtgaaatca
aacggagaatttgtggagaaaacttctgaaaagacaagtgggcaccaggtcctgttgatt
gcggctgctgacagtttagagggtctaccttcaactatcagacgctgctttagccatgaa
ataagcatggggcctttaacagaagagcaaagggctgaaatgctattgcattcacttcaa
aatgtttatggactccactctaatactgatttagagggttttgtaaaagaaatagttgga
cagacatctggtttcatgcccagggatatgtgtgctttaattgcggatgctggtgccagc
ttatttcccaggagcaatgccgaagtagacaaagatgaacctgaagatacagatagttct
cttagttccaaggtgacggaggacaacaaccagtcaaaagtttcagctctgaaacctggg
aaagaagacttggtgaatgctttggaacgatccaagaaaagaaatgcatcagcattgggt
acgccaaaggttccaaatgtaaaatgggaagatgttggtgggcttgaagatgtcaaaaaa
tcaatcctggatactgttcagttgcctctcttgcataaagatctatttgcatccggatta
cggaagcggtctggtgttcttttgtatggcccccctggaactggcaaaactttattagca
aaagctgttgctacagaatgctccttaaattttcttagtgtgaaaggtcctgaactgatc
aacatgtacataggagagtctgagaagaatgttcgagacatttttcagaaggccagatca
gcacgtccatgtgtcatattctttgatgagcttgattctcttgcaccagctcggggagct
tccggagattctggaggtgttatggacagagttgtttcacagatgcttgcagaaattgat
ggcttaagtgattcaacacaggatctatttattataggtgcaagtaatagaccggatttg
atagatccggcacttcttcgccctggtcgttttgataaattgttatatgttggagttaac
tctgatgcatcatacagagagagggtactgaaagctctaacgcgaaagttcaaattgcat
gaagatgtttcactttacgacattgcaaaaaagtgtccaccaaacttcaccggcgcagac
atgtatgccttgtgtgcagatgcttggttcctcgcggcaaagcgcaaggttttgaatgca
gatccagagtcctccaacccagataatgaagcagattctattgttgttgaatacgacgat
tttttccaggtcttagaagagcttcagccttccctctccacggctgagcttaagaagtat
gagcttcttagagatcaatttgaaggaacctctaaatga
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