Trifolium pratense (red clover): 123888799
Help
Entry
123888799 CDS
T08949
Name
(RefSeq) GPI transamidase component PIG-S
KO
K05291
GPI-anchor transamidase subunit S
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
123888799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIG-S
DUF7557
Motif
Other DBs
NCBI-GeneID:
123888799
NCBI-ProteinID:
XP_045793939
LinkDB
All DBs
Position
LG6:26728984..26734486
Genome browser
AA seq
592 aa
AA seq
DB search
MAEISNSPPPEPKLTEQNPQTQITESSTSQFDSKTMRKTKPGVKRLIMTLTVLISFILGF
PLLMKSIEIYRAPLPFDRIESFSSKIESSPLLFPCRFRAIFVGFNFRVSNNELEEVIRRK
MIDLSPGESRCGCDGDYSVSAVVDLEEVNAVDFGGKLRENNEEADELVKRLVNVYGEEKV
YSVVVVNGEEEVKAVVGKYRHAWIVGKVTQEDAVFRVAEIFAKVFVNGRSEDGVIRNEFM
PVGADGRIVLSFSLLNADPRDWIYDWNFSEIDETLLQPVIEALKPVADVTVESQVLYHTP
KSSFSYWDDEHGSHIFSTQDLPFFVNSNEWHLDTSVAAGGRSKVLQLVVYIPSAKECPLQ
LELPNGEISKTNGFISPMWGGVVVWNPQSCIKDFESKGPVRHKISPQDLHKVFEVLMGQL
RQLLGLKSDDIYVGESGTSILLGSERGFTEWELDALSRKHFCFNLLSCATTLGSLSRLVQ
SLPRMIIMDEIGKQVKFSLEAAKSAQTNATIGIYDASAVSSRHSRSLAEDAFFHPSIMSI
SYYSFEHCFAIYSPFFLPVTMHILLAAVREWKRYKQENRKYLTWKAKAKTTP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatatcaaattctccaccgccggaaccaaaactcaccgaacaaaacccccaa
actcagataactgaatcatccacttcacaattcgattccaaaaccatgcgaaaaactaaa
cccggcgttaaacgtctcatcatgactctcacagttctcatctctttcatattaggtttt
ccacttctcatgaaatccatcgaaatctaccgtgcacctctcccctttgaccgtattgaa
tcattctcctccaaaattgaatccagtccgttgctttttccatgtcgatttagagctatc
ttcgtcggtttcaattttagggtttcgaataacgaacttgaagaggttattcggaggaaa
atgattgatctcagccccggcgaatcgcgctgtggctgtgatggtgattactctgtttcg
gctgttgttgatttggaagaagtcaatgctgttgattttggcgggaaattgagggaaaat
aacgaagaggcggatgaattggtgaagagattggtgaatgtgtatggagaagagaaggtg
tatagtgttgtggtggtgaatggagaggaagaggtgaaggctgtggttgggaagtatcgg
cacgcgtggattgttggtaaggttacgcaggaggatgcggtttttcgtgtggcggagata
tttgctaaggtttttgttaatggtaggagtgaagatggtgtaattcgtaacgagtttatg
cctgttggtgctgatgggaggattgttctttcttttagtttgctcaatgcagacccgcga
gattggatttatgattggaatttcagtgaaatagatgagactttgttgcagcctgtcatc
gaggctttgaaacctgtagccgatgttacggttgaaagccaggttttgtaccacacaccg
aagtcttcgttttcttattgggatgacgagcacggcagccatatattcagtactcaggac
cttcctttctttgtgaattccaatgagtggcacttagatacttcagttgcagctggtggg
aggtcaaaagtattgcaacttgttgtatatattccatctgcgaaggagtgtcctcttcaa
ctggagcttccaaatggagagatctctaagactaatggctttatatctccaatgtgggga
ggtgttgtggtatggaacccccaaagttgtataaaggattttgaaagtaagggtccagtc
agacataagatttctcctcaggatctccataaggtttttgaagttctcatggggcagtta
cggcaacttcttggtctgaagtcagatgacatttatgttggtgagtcaggcacttccatt
ctcctagggagtgaaagaggtttcacagaatgggaattggatgctttgtcacggaagcat
ttttgttttaatctcctttcatgtgccacaacgcttggatctctttctagattggtacaa
tcattaccaaggatgattatcatggatgaaattggaaaacaggtgaagttttctctggaa
gctgcaaagtctgctcaaactaatgcgactattggaatatatgatgcttcggctgtgtca
tcaaggcattcaagatctcttgcagaggatgccttttttcatccatcaattatgtccatc
agctattattcgtttgagcattgttttgccatctattcgccattttttctgcctgttaca
atgcatattctcctagccgccgtaagagaatggaaaagatacaagcaagaaaatagaaag
tacttgacttggaaggccaaagcaaaaactacaccttaa
DBGET
integrated database retrieval system