Trifolium pratense (red clover): 123888837
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Entry
123888837 CDS
T08949
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123888837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123888837
Spliceosome [BR:
tpra03041
]
Common components
Common spliceosomal components
SR proteins
123888837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
123888837
NCBI-ProteinID:
XP_045793983
LinkDB
All DBs
Position
LG6:8506388..8509802
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AA seq
315 aa
AA seq
DB search
MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGRVRDVDMKHDYAFVEFSDPRDADDA
RYNLDGRDVDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPPPGSGRCFNCGIDGHWARDC
KAGDWKNKCYRCGERGHIEKNCKNSPKKLSSRHARSVSRSPGRSRSPARSRSPVRSRSPA
RSRSPARSRSPRRGRSRSYSPARSYSRSRSPVRRDRSPVADDRSRSPPPSKSRKYSRSPE
GSPQKSTSPGNDRVVATQDGSDYSDGPKVKSRSPSRDNEDSPKANGRSRSRSRSPRDEDR
SPIEDDDNNRRSPSP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatgatgataagtatggcaatactcgcctctatgttggtcgcttgtcctca
cggacccgttcacgcgatctggagcgggttttcagcagatatggaagagttcgagatgtg
gatatgaagcatgattacgccttcgttgaatttagcgatcctcgagatgctgatgatgca
agatacaatttggatgggcgtgatgttgatggaagtcgtcttattgtggaatttgcaaaa
ggggttcctcggggttcccgcgactctcgggattctcgggaatatttgggtcgaggtcca
cctcctggttctggacgctgctttaactgtggcattgatggccactgggctagagattgc
aaagctggggactggaagaacaagtgttaccgctgtggggagagaggtcatatagaaaaa
aactgcaagaacagtcccaaaaagttgagcagcagacatgcacggagtgtttcacgttct
ccaggcaggtctcgttctccagccaggtcacgttctccagtcaggtcacgttctcctgcc
agatcacgttctcctgccagatcacgctctcctaggcgcggcagaagccgaagctacagc
ccagctcgcagctatagccgatcaagatctcctgtcagaagagataggagcccagttgct
gatgatagatcacggagtcctccaccctccaagtcaaggaagtatagtcgatctcctgaa
ggcagtcctcaaaagagcacatcacctgggaatgatagggtggttgcaacccaagatggg
tctgattacagtgatggtcctaaagtgaagagcagaagcccctcaagagacaatgaagat
agccctaaggctaatgggcgtagccgaagccgtagccgcagccccagggatgaggatagg
agccccatagaggatgatgacaacaaccgccgctctccatcaccttag
DBGET
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