Trifolium pratense (red clover): 123889066
Help
Entry
123889066 CDS
T08949
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Module
tpra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123889066
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
123889066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Ig_NFAM1
Motif
Other DBs
NCBI-GeneID:
123889066
NCBI-ProteinID:
XP_045794201
LinkDB
All DBs
Position
LG6:2947656..2949679
Genome browser
AA seq
561 aa
AA seq
DB search
MKQQKYGDFANVHNQMDDDSKEEEELVSNIVIMGVSLLLLGLITIAFVTNIGGSKTAPVL
KNLESICSKTDAPDSCLHVLKHVGERATVLDYIKASLNATLEEFLVVNIPKPFVEKVLTP
KQAQSYRDCLELLNMGIDELNFVYMIANSSVEEVMRVDPKDIMNSLSAIISYQQTCANEL
VRTDTYEIFGYSLSIPTLLTKMTLAIVENFVKIPEFDDKDLDGYKKLQSKDYEHTFKGVE
KTIKIVAKDGSGNFTSINESIHECIMNIEESCVIYVKKGKYEERVVIPNNLGQVIMYGDG
PMDTIVTGITIGDPMLTTPFQSATFVVKGKGFICKNMGFIAPANITGAPALLVLSDRAVF
FNCKIDGEEGSLYAVAQRQFYRDCEIRGSVDIIKGDSAALIQNSIITVKHRNSTNLALRK
NVVSAQTRLDNYERTGLVIQNCTVVAEQGHDSLVRSTCLGTPRNEYSRTIIMESFLGDVI
RPKGWCKWSDNYGIDTATFREYNNRGPGAGTNKRVHWESYRTISENQRLDMKFFTAGEFI
QADQWLIHTGIPYESGFLFHT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacagaaatatggtgattttgcaaatgttcataatcaaatggacgatgattca
aaagaggaagaggaattagtctcaaacatagtaatcatgggtgtctccttgttgcttctt
ggattgataaccattgcttttgttaccaacataggtggctccaaaaccgcacctgttctt
aagaaccttgaatctatctgttcaaaaacagatgcaccagattcttgtcttcatgtctta
aaacatgtaggtgaaagagccacggttttggattatataaaagcttctcttaatgcaacc
cttgaagaatttttggttgttaacatacctaaaccttttgttgaaaaagttctaacacct
aagcaagcacaatcatatagagattgtttggaattgttgaatatgggaatagatgaacta
aactttgtgtatatgatcgcgaattcgtctgttgaagaagtaatgcgagtagacccgaaa
gatattatgaatagcttaagtgctatcatttcatatcaacaaacttgtgctaacgaattg
gtgagaacagatacttatgagattttcgggtattctttgagcataccaactcttttgaca
aagatgacattagccattgttgagaatttcgtcaagattccagaattcgacgataaagac
cttgatgggtataaaaaattgcaatcaaaagactatgaacacacatttaagggagttgag
aagacaataaaaattgtggctaaagatggaagtgggaattttacaagtataaatgagtca
atccatgaatgtataatgaatatagaggagtcatgtgttatttatgtgaagaaaggtaaa
tatgaggagagagtggtgatacctaataatttaggccaagtgatcatgtatggtgatggc
cctatggataccattgttactggaatcaccataggagaccccatgcttacaactcccttt
cagtcagctacttttgtggtaaaggggaaaggatttatctgcaaaaatatgggattcatt
gctccagctaatataacaggagcaccagcactccttgtactttctgatcgggcagtattc
ttcaactgcaaaattgatggcgaagaaggaagtttatacgcagttgcgcaacgccaattc
tatagagactgcgagattcgcggtagtgtagacatcatcaaaggagattcagcagcctta
attcaaaactcaataatcactgtgaagcatcgaaattcaactaacttagctttaagaaaa
aatgtggtgagtgctcaaacaagattagacaattatgaaagaactggtcttgtgattcaa
aactgcaccgttgtagcagaacaaggtcatgatagtcttgttcgttcgacgtgtttagga
actccgcgtaatgaatattcaagaacaatcataatggaatcgtttctcggtgatgttata
cgtccaaaaggttggtgtaaatggagtgacaattatggaattgatacagcaacatttaga
gagtataataacagaggacctggtgcaggaactaataagagggtgcattgggaaagttat
agaacaatttctgagaatcagagacttgatatgaaattttttactgctggtgagtttatt
caagcagatcaatggttgatacatacaggcattccatatgaatctggatttctctttcat
acatag
DBGET
integrated database retrieval system
