Trifolium pratense (red clover): 123889177
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Entry
123889177 CDS
T08949
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123889177
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123889177
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Helicases
123889177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Cas3-like_C_2
B12-binding
Motif
Other DBs
NCBI-GeneID:
123889177
NCBI-ProteinID:
XP_045794355
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All DBs
Position
LG6:44806751..44817535
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AA seq
795 aa
AA seq
DB search
MAEASTRKAKRKNRTLKTQDLELDRFDSLPWNSSLPQPTENDDNSFSLFTGSNELEGGFL
SLEEIDEAEYGLDIPDPENHDRKHNSKQDKKLNNQKQDGACSDGETVKDESTKSKVKKKK
KKKSKDAKENQKVQHSNTGAAADVKDTAGEENIDENEYYAWNELRLHPLLMKAIHKLGFK
EPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIFQRLLEERDKAANMDSEKGEEA
EKVAPTGLLRSLIIAPTRELALQVKDHLEKVAKHINVKVTAIVGGILPEKQQRLLKARSE
IVVATPGRLWELMSSGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNIPG
EDNSQDAQNCVTVSSFQRKKRQTLVFSATVALSADFRKKLKRGSMQKKQPSTDSLDSIEN
LSERAGMRPNAAIIDLTNPSILAAKIEESFIECTEDNKDAHLYYILTVHGQGRTIVFCTS
IAALRHISSILRILGTNVWTLHAQMQQRARLKAMDRFRENDNGILVATDVAARGLDIPGV
RTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPKDTSKFASLCKSFSKDSFQRFPL
ENSYMPEVLKRLSLARQIDKITRKDSQEKAEKSWFDRNACSVDLVTENYDSEEEQVNKCR
QKKASSKQLKKLQMELSMLISRPLQSKTFSHRYLAGAGVTPLLQEQLQQLTRQKLSDRQG
AVFGKKGKLVVIGQDCVDALHALRSAGEEVRMDIKDSTRQKNTVNSKRKRKVEKTRLRDQ
RKKQKRKQNQEDEEE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcttcgacgagaaaggcgaaaagaaagaaccgaacccttaaaactcaggac
cttgaactcgaccgtttcgactcacttccatggaactcttctcttcctcaacccactgaa
aacgatgacaactcgttttcactctttactggctccaatgaactcgaaggaggttttctt
tcactggaggagattgatgaagctgagtatggtttagatattcccgatcctgaaaatcat
gacagaaagcacaattctaaacaggacaagaagttgaataatcagaagcaggacggtgct
tgtagtgatggagaaacagtgaaggatgagagcaccaagtctaaagtgaagaaaaagaaa
aagaagaaaagcaaggatgcaaaagaaaaccagaaagttcaacattcaaatactggtgca
gcggctgatgtgaaggacactgctggggaagagaacattgatgaaaatgaatattatgca
tggaacgagttgaggcttcatcctctcttaatgaaagcaatacacaaactgggattcaag
gaaccaacaccgatacagaaagcctgtattccggctgctgctcatcaagggaaggatgtt
attggtgctgcagagacgggatctggtaaaacacttgcatttggtttgcccatttttcaa
cgtcttttggaggagcgcgacaaggctgcaaatatggattcagaaaagggtgaagaagca
gaaaaagttgctcctacgggccttttgaggagtcttattattgctccgaccagagaactt
gcacttcaggtcaaagatcatctggaaaaagtagctaagcatattaatgttaaggtgacc
gctatagttggtggtattttaccagaaaagcagcaaagacttttaaaagcaaggtctgag
attgtggtcgctactccagggaggttatgggaacttatgtcatctggagaaaaacacctg
gttgagttacattcactgtctttttttgtgcttgacgaggctgatcgaatggtacaaaat
ggtcattttaaggagttgcaatctataattgacatgcttcccatgtcaaatatccctggt
gaagataattctcaagatgcacaaaattgtgttacagtttctagcttccaaagaaagaaa
aggcaaactcttgttttctcagcaactgtcgcactgtccgctgattttcgcaagaagtta
aagcgtggttcaatgcagaaaaagcaaccatcaacagatagtttggattctattgaaaat
ctttctgagcgagcaggaatgagacccaatgctgcaattattgatcttaccaatccatca
atattagcagctaagattgaagagtcctttattgaatgcacagaagacaataaagatgcc
catttgtattatattcttactgtccacggtcaaggccggacaatagttttctgtacgtcg
attgcagctttacgccatatttcttccatattgcgcattcttggcaccaatgtttggact
cttcatgctcaaatgcaacagagagcgcgtttaaaggccatggaccgctttcgcgaaaat
gacaacggcatacttgttgctacagatgttgctgcaaggggtcttgatattcctggcgtc
agaactgttgtccactatcagcttccacattcagcagaggtttatgttcatagaagtgga
agaacagctagagcttctgctgaaggttgtagcattgctttaatctccccaaaggataca
tcaaagtttgcttcattgtgcaagtcattttcaaaggatagctttcagcggtttccttta
gagaactcatacatgccagaggttctaaaacgattgtctcttgcacgtcaaatagacaag
ataactaggaaggattcccaggagaaggcagaaaaaagctggtttgatcggaatgcttgc
tcagtggatttagtcactgaaaattatgacagtgaggaggaacaagttaataaatgtagg
caaaagaaagccagctctaagcaattgaagaaattgcagatggagctcagtatgctgatt
tcacgtcctttgcaatcaaaaacattttcacatcgatatttagctggggctggtgtaaca
cccctcttgcaggaacaattgcaacaattaacaaggcaaaaactaagtgatcgccagggt
gcagtattcggcaaaaagggaaaattggttgtgatcggtcaagattgtgtagacgcactt
catgcacttcggagtgctggggaagaggtgcgcatggatatcaaggattcaacacgacag
aaaaataccgtgaattcaaaaagaaaaagaaaagtggagaaaacacgtttacgtgatcag
cgtaaaaagcagaagagaaagcaaaaccaggaggacgaggaagaataa
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