Trifolium pratense (red clover): 123889307
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Entry
123889307 CDS
T08949
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123889307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123889307
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123889307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
ABC2_membrane_3
AAA
AAA_28
DO-GTPase2
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
123889307
NCBI-ProteinID:
XP_045794545
LinkDB
All DBs
Position
LG6:complement(36470642..36478648)
Genome browser
AA seq
1483 aa
AA seq
DB search
MEGGGSFRIGSSSIWRNTDADEIFSNSFHQEDDEEALKWAAIQNLPTFARLRKGLLTSLQ
GEAIEIDIEKLGLQERKDLLGRLVRLAEEDNEKFLLKLKDRIDRVGVDLPTIEVRFEHLN
IEAEAHVGSRSLPTFTNFWVNIVEGLLNSLHVLPSRKQHLNILRNVSGIIKPSRMTLLLG
PPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHEMNEFVPQRTSAYVDQHDLHIGEMTVRE
TLAFSARVQGVGPRYDLLAELSRREKHANIMPDPDIDVYMKAIATEGQKTNLITDYVLRV
LGLEICADTLVGNAMVRGISGGQRKRVTTGEMLVGPNKALFMDEISTGLDSSTTFQIVNS
MKQYVHILKGTAVISLLQPPPETYNLFDDIILLSDSQIIYQGPRENVLEFFESMGFKCPN
RKGVADFLQEVTSRKDQEQYWEHKDQPYRFVTAEEFSEAFQSFHVGIRLGDELGTEFDKS
KSHPSALTTKKYGVGQWELYKALLSREYLLMKRNSFVYIFKLCQLSLMAIVAMTIFLRTE
MHRDSVTHGGIYVGALFFGVVVIMFNGMAEISLVVSRLPVFYKQRGYLFYPPWAFALPSW
ILKIPLTLVEAAAWVFLTYYVIGFDPYIGRFFRQYLILVLVHQMASALFRFIAAIGRDMT
VALTFGSFVLAILFAMSGFVLSKDSIKKGWIWGFWISPMMYGQNAMVNNEFFGNSWKHVL
PNSTEPLGVEVLKSRGYFTESYWYWIGVVALIGYTLVFNFGYILALTFLNRECLHLRCII
KQTRLVHVLIYEKNYHAALGKHQTVIPEESQNNEENGGSRKRTNVLKFIKNSFSQHSTRV
KNGECTSGSVSPSTLSSRQETVAAETNHSRKRGMVLPFEPHSITFDDVTYSVGMPQEMKN
RGFVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLSGRKTGGYIDGNITISGYP
KKQETFARIAGYCEQNDIHSPYVTVYESLLYSAWLRLSPDINAETRKMFIEEVMELVELK
PLRNALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT
VDTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGHHSSNLIGYFEGIQGVRKI
KDGYNPATWMLEVTTSSKEVELGIDFAQVYKNSELYGRNKVLIKELSNPASGSKDLYFLS
QYSRSFLTQCMACLWKQHWSYWRNPLYTSIKLLYSTLVAVLLGTMFWNLGSKIEKEQDLF
NAMGSMYAAVLLIGIKNSTSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVVIELPYVFV
QTVVYCFIVYAMIGFEWNVAKVLWCLFFMYFTFLYFTFYGMMSVAMTPNSHISTIVSSAF
YAVWNLFSGFIIPRPRIPVWWRWYSWINPVAWSLYGLVASQYGDIKHNIDTNDGRQTVEG
FLRNYFGFKHDFLGVVAIVNVAFPIAFALVFAISIKMFNFQRR
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggaggtagttttaggattggaagttcatcaatttggaggaacactgatgct
gatgagattttttcaaattcttttcaccaagaagatgatgaagaagctcttaaatgggct
gcaattcagaatcttcctacttttgcgcgtttgaggaaaggtttgctcacttcacttcaa
ggtgaagctattgagattgatatcgagaaacttgggttgcaagaaagaaaagatttgctt
ggaagacttgttagacttgctgaagaggacaatgaaaagtttttgctcaaactcaaggat
cgaatcgacagagttggtgttgatcttcctacgatagaggttcgattcgagcacttgaat
atcgaagcagaagctcatgtaggaagcagatctttacctaccttcactaatttctgggtt
aatatagttgagggactattgaactctctgcatgtacttccaagtagaaaacaacaccta
aatattctcaggaatgttagtggaataataaagccttcaagaatgacattgcttttgggt
cctccaagttctggaaaaaccacactcctgttggccttggctggaaagcttgatccaaaa
ttgaagttttctggaaaggtgacttataatgggcacgagatgaatgagtttgtgccgcaa
agaacttctgcttatgtggatcaacatgatcttcacattggagaaatgactgtcagagaa
accttggccttctcagcaagagtccaaggagtcgggcctcgttatgacttgctagctgaa
ttgtccagaagagaaaaacatgcaaatatcatgcctgatccagatattgatgtgtacatg
aaggctatagcaactgaaggccaaaagactaatttgataacagattatgtcctaagggtt
ttgggattagagatttgtgctgatactttagtaggaaatgcaatggtaagaggtatttct
gggggacaaaggaaacgcgtcacaacgggggagatgttggttggacctaataaagcacta
ttcatggatgaaatatctactggtttggatagctcaacaacttttcaaattgtgaattca
atgaaacaatatgttcacattctcaaaggaaccgcggttatctcactcctgcagccacca
ccagagacttacaatctttttgatgacattattctactttctgatagtcaaattatatat
caaggtccccgcgagaacgtgcttgaatttttcgaatcaatgggttttaaatgtcctaac
aggaaaggagtggcagattttttgcaagaagtgacatcaaggaaagatcaagagcagtac
tgggaacacaaggatcagccttatagatttgtcacagctgaagagttttctgaggcattt
caatcatttcatgttggcataagacttggtgatgaacttggtactgaatttgacaagtct
aagagccatccatctgccttgacaaccaagaaatatggcgtgggacaatgggaactgtat
aaagctctcttatcaagagaatatttactcatgaagcgcaattcatttgtctacatcttc
aagctttgccaactgtctttaatggcaattgttgcgatgaccatcttcttacggactgag
atgcacagagattccgtgactcatggaggcatatatgtaggtgcattgttctttggtgtt
gtagtgataatgttcaatggaatggctgaaatttccctggtagtttcaaggcttcctgtt
ttctacaagcaaaggggatacctcttttatcctccatgggcatttgctcttccttcatgg
atcctaaaaatccctttgactttggtggaagctgctgcttgggtattcctcacttattat
gtcattggttttgatccatatattggaagatttttcagacaataccttattcttgtacta
gtacaccagatggcttctgcattattcagattcattgcagcaatcgggagagatatgaca
gttgctttaacatttggatcatttgtacttgccatcctttttgctatgagtggttttgtc
ctatcaaaagacagtataaaaaaagggtggatatggggattttggatatcacctatgatg
tatggacaaaatgccatggtcaataatgagttctttggtaatagctggaaacatgttctt
cctaactcaacggagccactaggagttgaagttttgaaatctcgcgggtatttcaccgag
tcatactggtactggattggtgtggttgctttgattggatatacattagttttcaacttt
ggctatatccttgctctcactttcttgaatcgtgagtgtcttcaccttagatgtataata
aaacaaacacgactagtccatgtactaatatacgaaaaaaattatcatgcagcactcgga
aagcatcaaactgttattccggaggaatctcaaaacaatgaggaaaatggtggtagcaga
aaaagaactaatgtattgaagttcataaagaatagcttttcccagcactcaactagagtg
aaaaacggtgaatgtacaagtggaagcgtctctcctagtactttatctagtagacaggaa
acagttgcggcagagacaaatcatagtaggaaaagaggaatggttcttccttttgaacca
cattcaatcacctttgatgatgttacgtattctgtaggcatgccgcaggaaatgaaaaac
cgaggttttgttgaggataagttagttcttttgaaaggtgtcagtggagctttcagacca
ggtgttctcactgctctaatgggggtgactggtgctggaaaaacaactttgatggatgtg
ctctctggtagaaaaactggtggatatatcgatgggaacattacaatttctggctatcca
aagaagcaagaaacctttgcaagaattgctggatactgtgagcaaaatgatatccactct
ccttatgttactgtctatgagtccttgctctattcagcatggctccgattgtcccccgac
atcaatgctgaaacccggaagatgttcattgaggaagttatggaacttgtggaattgaaa
ccactacgaaacgcattagtaggacttcctggtgttagcggtctctcgacagagcagcgc
aaaaggttgactattgcagttgagttggtagccaatccttctataatattcatggatgag
ccaacttctgggttagatgcaagggctgcagctattgtgatgaggacagttaggaacaca
gtagacaccggaagaacagttgtttgtaccattcaccagcctagtatcgatatatttgaa
tcttttgatgagcttttgctacttaagcaaggagggcaagagatatatgtggggccactt
ggacatcattcgtccaatttaattggttacttcgaaggaatccaaggtgttagaaaaatt
aaagacggttataatccagcaacatggatgttggaagtcacaacttcatctaaagaagtg
gaattggggattgattttgcacaagtctacaaaaattcagaattatacgggagaaacaaa
gtacttatcaaagaattgagtaatccagcttctggttcaaaagatctttattttctatca
cagtactcaagatcctttttgacacaatgcatggcttgtttatggaaacaacattggtct
tattggcgtaatcctctatatacctccataaaacttttgtactcaaccttggtagctgtt
ttgcttggaacaatgttttggaaccttggctctaaaattgaaaaggagcaagatcttttt
aatgccatgggatccatgtatgctgctgttctcttaattggcataaaaaattctacctca
gtgcagccagtggtttctgtagaacgaacggtcttttatagagaaagagcagccggaatg
tattctgctttcccatatgcatttggtcaggttgtaatcgagcttccatatgtctttgta
caaactgtggtctattgctttatagtttatgctatgattggttttgagtggaatgtggct
aaagttttgtggtgtctattcttcatgtatttcaccttcctctacttcaccttctatggt
atgatgtcagtggccatgaccccaaacagccacatttccactatagtttcctctgcattc
tatgctgtatggaatctcttctcaggattcataatccctagaccaaggattccagtgtgg
tggaggtggtacagttggataaatccagtggcttggagtttgtatggattagtggcttca
caatatggagatataaaacacaacattgataccaatgatggaagacaaacagtagaaggt
tttctcagaaattactttggtttcaagcatgattttctaggagtggttgctattgttaat
gttgcatttccaatagcttttgctttggtctttgccatatcaatcaagatgtttaatttc
caaaggcgttaa
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