Trifolium pratense (red clover): 123889308
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Entry
123889308 CDS
T08949
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123889308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123889308
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123889308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
ABC2_membrane_3
AAA
AAA_28
AAA_25
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
123889308
NCBI-ProteinID:
XP_045794547
LinkDB
All DBs
Position
LG6:36499451..36507565
Genome browser
AA seq
1461 aa
AA seq
DB search
MAMAMEGGDSFRIGSSSIWRNTDADEIFSNSFHQQDDDEEALKWAAIQKLPTFARLKKGL
LTSLQGEATEIDIEKLGLQERKDLLGRLVRLAEEDNEKFLLKLKDRIDRVGIDLPTIEVR
FEHLNIEAEARVGSRSLPTFTNFMVNIVEGLLNSLHVIPSRKQHLNILKDVSGIIKPSRM
TLLLGPPSSGKTTLLLALAGKLDPTLKFSGKVTYNGHQMNEFVPQRTSAYVDQHDLHIGE
MTVRETLAFSARVQGVGPRYDLLAELSRREKQANIIPDPDIDVYMKAIATEGQKTNLITD
YVLRVLGLEICADTFVGNAMVRGISGGQRKRVTTGEMLVGPYKALFMDEISTGLDSSTTF
QIVNSMKQYVHILKGTAVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLEFFESIG
FKCPNRKGVADFLQEVTSRKDQEQYWEHKEQPYRFVTAEEFSDAFQSFHVGIRLGDELGT
EFDKSKSHPSALTTKKYGVGQWELYKALLSREYLLMKRNSFVYIFKLCQLSIMAIVTMTI
FFRTEMHRDSVTHGGIYVGALFYGVVVIMFNGLAEISMVVSRLPVFYKQRGYLFYPPWAF
ALPAWILKIPLTFVEVAVWVFLTYYVIGFDPYIGRFFRQYLILVLVNQMASGLFRFIAAV
GRDMTVALTFGSFVIANLFAMSGFVLSKDSIKKWWIWGFWISPMMYGQNAMVNNEFLGNN
WKHVLPNSTEPLGVEVLKSRGYFTESYWYWIGVVALIGYTLVFNFGYILALTFLNSLGKH
QTVIPEESQNNEQNGDSRKRTNVLKFIKDNFSQHSNRVRNGECTSGSISPSTLSSGQETV
AAETNHSRKRGMVLPFEPHSITFDEVTYSVDMPQEMINRGFVEDKLVLLKGVSGAFRPGV
LTALMGVTGAGKTTLMDVLAGRKTGGYIEGTITISGYPKKQETFARISGYCEQNDIHSPH
VTVYESLVYSAWLRLSPDINAETRKMFIEEVMELVELKPLRNGLVGLPGVSGLSTEQRKR
LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESF
DELLLLKQGGQETYMGPLGHHSSNLIGYFEGIEGVSKIKDGYNPATWMLEVTTSSKEVEL
GIDFAEVYKNSELYGRNKALIKELSTPASGSKDLYFHSQYSRSFLTQCMACLWKQHWSYW
RNPLYTAIRFLYSTVVAVLLGTMFWNLGSKIEKERDLFNAMGSMYAAVLLIGIKNSTSVQ
PVVSVERTVFYRERAAGMYSAFPYAFGQVVIELPYVFVQSAVYGFIVYAMIGFEWNVAKV
LCFLFFMYFTFLYFTFFGMMAVSVTPNNHISTIVSSAFYTLWNLFSGFVIPRPRIPVWWR
WYSWINPMAWSLYGLVASQYGDIKHNIDTNDGRQTVEGFVRNYFGFKHDFLGVVAIVNVA
FPIAFALVFAVSIKMFNFQRR
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgatggagggtggagatagttttaggattggtagttcatcaatttggagg
aacactgatgctgatgagattttttcaaattcttttcaccaacaagatgatgatgaagag
gctcttaaatgggctgcgattcagaaacttcctacgtttgctcgtttgaagaaaggtttg
cttacttcacttcaaggtgaagccactgagatcgatatcgagaaacttgggttgcaagaa
agaaaagatttgcttggaagactcgttagacttgctgaagaggacaatgaaaagtttttg
cttaaactcaaggatcgaattgacagagttggaattgatcttcctacgatagaggttcga
ttcgagcacttgaatatcgaagcagaagctcgtgtaggaagcagatctttgccaaccttc
actaacttcatggttaatatagttgagggactattgaactctcttcatgtaattccaagt
agaaaacaacatttaaatattctgaaggatgttagtggaataataaagccttcaagaatg
acattgcttttgggccctccaagttctggaaaaactacactcttgttggccttggctgga
aaacttgatccaacattgaagttttctggaaaggttacttataatggtcatcagatgaat
gagtttgtgccccagagaacttctgcatatgtagatcaacatgatcttcacattggagaa
atgactgttagagaaaccctggccttctcagcaagagtccaaggagtcgggcctcgttat
gacttgctagctgaactgtccagaagagaaaaacaagcaaatatcatacccgatccagat
attgatgtgtacatgaaggctatagctactgaaggccagaagacaaatttgataacagat
tacgtactaagggttttgggattagagatctgtgctgatacttttgtaggaaatgcaatg
gtaagaggtatttctgggggacaaaggaaacgcgttacaacaggggagatgttggttgga
ccgtataaagctctattcatggatgaaatatctactggtttggatagctcaacaactttt
caaattgtgaattcaatgaagcaatatgtccacattctcaaaggaaccgcggttatctca
ctcctgcagccaccgccagagacttacaatctttttgatgacattattctactctctgat
agtcacattatataccagggtcctcgtgagcacgtacttgaattttttgaatcaatcggt
tttaaatgtcctaacaggaaaggagtggcagattttttgcaagaagtgacatcaaggaaa
gatcaagagcagtactgggaacacaaggaacaaccttatagatttgtcacagctgaagag
ttttctgatgcatttcaatcgtttcatgttggcataagacttggtgatgaacttggtact
gaatttgacaagtctaagagccatccatctgccttgacaaccaagaaatatggcgtggga
caatgggaactgtataaagctctcttatcaagagaatatttacttatgaagcgcaattca
tttgtctacattttcaagctttgccaactatctataatggcaattgttacgatgactatc
ttcttccggactgagatgcacagagattctgtgactcatggaggcatatatgtaggtgca
ttgttctatggtgttgtagtgataatgttcaatggattggctgaaatttccatggtagtt
tcaaggcttcctgttttctacaagcaaaggggatacctcttttatcctccatgggcattt
gctcttcctgcatggatcctaaaaatccctttgacttttgtggaagttgctgtttgggta
ttcctcacctattatgtcattggttttgatccatatattggaagatttttcagacaatac
cttattcttgtactagtaaaccagatggcttctggattattcagattcattgcagcagtt
gggagagatatgacagttgctttaacatttggatcatttgtaattgccaacctttttgcc
atgagtggttttgtcctatcaaaagatagtataaaaaaatggtggatatggggattttgg
atatcacctatgatgtatggacaaaatgccatggttaataatgagttccttggtaataac
tggaaacatgttcttcccaactcaacggagccactaggagttgaagttttgaaatctcgc
gggtatttcaccgagtcatactggtactggattggtgtggttgctttgattggatataca
ttagttttcaactttggctatatccttgctctcactttcttgaattcacttggaaagcat
caaactgttattccagaggaatctcaaaacaatgagcaaaatggtgatagcagaaaaaga
actaacgtattgaagttcataaaggataacttttcacagcactcaaatagagtgagaaac
ggcgaatgtacaagtggaagcatctctcctagtactttatctagtggacaggaaactgtt
gctgcagagacaaatcatagtaggaaacgaggaatggttcttccttttgaaccacattca
atcacctttgatgaagttacatattctgttgacatgccgcaggaaatgataaaccgaggt
tttgttgaggataagttggttcttttgaaaggtgtcagtggagctttcagaccaggtgtt
ctcactgctctaatgggtgtgactggtgctggcaaaacaactctgatggatgtgctcgct
ggtagaaaaactggtgggtatatcgaggggaccatcacaatttctggttatccaaagaag
caagaaacctttgcaaggatttctggatactgtgagcaaaatgatattcactctcctcat
gttactgtctatgagtccttagtctattcagcatggctccgattgtcccctgacatcaat
gctgaaacccggaagatgttcattgaggaagttatggaacttgtggaattgaaaccacta
agaaacggattagtaggactgcctggtgttagcggtctctcaacagagcagcgcaaaagg
ttgactattgcagttgagttggtagccaatccgtctataatattcatggatgagccaact
tctgggctagatgcaagggctgcagctattgtgatgagaacagttaggaacacagtagac
accggaagaacagttgtttgtaccatccaccagcctagcattgatatatttgaatcgttt
gatgagcttttgctacttaagcaaggagggcaagagacttatatggggccacttggacat
cattcttctaatttaatcggttattttgaaggaatcgaaggtgtaagcaaaattaaagac
ggctataatccagcaacatggatgttggaagtcacaacttcatctaaagaagtggaattg
gggattgattttgcagaagtgtacaaaaattcagaattatacgggagaaacaaagcactt
atcaaagaattgagtactccagcttctggctcaaaagatctttattttcattcacagtac
tcaagatcgtttttgacacaatgcatggcttgcttatggaaacaacattggtcttattgg
cgcaatcctctatataccgccataagatttctgtactcaaccgtggtagctgttttgctt
ggaaccatgttttggaaccttggctccaaaattgaaaaggaacgagatctttttaatgcc
atggggtccatgtatgctgctgttctcttaattggcataaaaaattcaacttcggtgcag
ccagtggtttctgtagaacgaacggtcttttatagagaaagagcagccggaatgtattca
gctttcccatatgcatttggtcaggttgtaattgagcttccatatgtttttgtacaatct
gcggtctatggatttatagtttatgctatgattggttttgagtggaatgtggctaaagtt
ttgtgtttcctattcttcatgtatttcaccttcctctacttcaccttctttggcatgatg
gcagtttccgtgaccccaaacaaccacatttcgactatagtttcctctgcattctatacc
ttatggaatcttttctcaggattcgtaatcccaagaccaaggattccagtgtggtggagg
tggtacagttggataaatccaatggcttggagtttgtatggattagtggcttcacaatat
ggagatataaaacacaacattgataccaatgatggaagacaaacagtagaaggttttgtg
agaaattactttggtttcaagcatgattttctaggagtggttgctattgttaatgttgca
tttccaatagcttttgctttggtctttgccgtatcaatcaagatgttcaatttccaaagg
cgttaa
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