Trifolium pratense (red clover): 123889311
Help
Entry
123889311 CDS
T08949
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123889311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123889311
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123889311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_25
AAA
AAA_16
MMR_HSR1
nSTAND3
DO-GTPase2
AAA_15
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
123889311
NCBI-ProteinID:
XP_045794549
LinkDB
All DBs
Position
LG6:complement(36425877..36433402)
Genome browser
AA seq
1425 aa
AA seq
DB search
MMEGGGSFRIDSSSIWRNTDAAEIFSNSFHQEDDEDALKWAAIQKLPTFARLRKGLLTSL
QGEATEIDIENLGLQERRDLLERLVRLAEKDNEEFLLKLKNRIDRVGIDLPTIEVRFDHL
NIEAEAHVGSRSLPTFTNSMVNIVEGLLNSLHVLPSRKQQLNILKDVSGIIKPSRMTLLL
GPPNSGKTTLLLALAGKLDPKLKFSGKVTYNGHEMNEFVPQRTAAYVDQHDLHIGEMTVR
ETLAFSARVQGVGPRYDLLAELSRREKHANIMPDPDIDVYMKAIATEGQKANLITDYVLR
ILGLEICADTVVGNAMLRGISGGQKKRVTTGEMLVGPYKALFMDEISTGLDSSTTFQIVN
SMKHYVHILKGTVVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLEFFESIGFKCP
NRKGVADFLQEVTSRKDQEQYWQHKAQPYRFVTAEEFSDAFQSFHVGIRLGDELGTEFDK
SKSHPSALTTKKYGVGKLELYKACLSREYLLMKRNSFVYIFKLGQVCIMAMIAMTIFFRT
EMHHDSVTHGGIYVGALFFGVIVIMFNGMAEISMVVSRLPVFYKQRGYLFYPPWAFALPA
WILKFPLTFVEVAVWVFLTYYVIGFDPYIGRFLRQYLILVLVHQMASALFRFIAAVGRDM
TMALTFGSFALAILFSMSGFALSKDNIKKWWIWGFWISPMMYAQNAMVNNEFLGNKWKHV
LPNSKEPIGVEVLKSRGFFTESYFYWICVGALIGYTLVLNFGYILALTFLNPLGKHQTVI
PEGSQHSNKVRNGEITLSSRKETVVVETNHSRKRGMVLPFEPHSITFDEVTYSVDMPQEM
RNRGVLEDKLVLLKGVSGAFRPGVLTALMGITGAGKTTLMDVLSGRKTGGYIGGNVTISG
FPKKQETFARISGYCEQNDIHSPCVTVYESLLYSAWLRLSPNINAETRSMFIEEVIELVE
LKPLQNALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR
NTVDTGRTVVCTIHQPSIDVFESFDELLLLKQGGQEMYVGPLGHHSSNLISYFEGIQGIS
KIKDGYNPATWMLEVTTSSKEVELGIDFAEVYKNSELYRSNKALIKELSTPAPGSKDLYF
HSQYSRSFFTQCMACLWKQHWSYWRNPEYTVVRFLYSSAVAVLLGSMFWDLGSKIERDQD
LFNAMGSMYAAVILIGVKNGSSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIELPYV
FVQSVVYGIIVYAMIGFEWTVVKVMWCIFYMFFTFLYFTYYGMMSVAMTPNNHISTIISS
AFYSAWNLFSGFIVPRPRIPVWWRWYSWANPVAWSLYGLVASQYGDIKHNIDTNDGRQTV
EGFVRNYFGFKHDFLGVVAIVNVAFPIVFALVFAISIKMFNFQRR
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggtggaggtagttttaggattgatagttcatcaatttggaggaacactgat
gctgctgagattttttcaaattcttttcatcaagaagatgatgaagatgctcttaaatgg
gctgcaattcagaaacttcctacttttgcgcgtttgaggaaaggtttgcttacttcactt
caaggtgaagccacggagatcgatattgagaaccttgggttgcaagaaagaagagatttg
cttgaaagacttgttagacttgctgaaaaggacaatgaggagtttttgctcaaactcaag
aatcgaattgacagagttggaattgatcttcctacgatagaggttcgatttgatcacttg
aatatcgaagcagaagctcatgtcggaagcagatctttgcctaccttcactaactccatg
gttaatatagttgagggcctattgaactctctgcatgtacttccaagtagaaaacaacag
ttaaatattctgaaggatgttagtggaataataaagccttcaagaatgacattgcttttg
ggccctccaaattctggaaaaaccacactcctgttggccttggctggaaaacttgatcca
aaactgaagttttctggaaaggtgacttataatggtcatgagatgaatgagtttgtgcct
caaagaactgctgcttatgtggatcaacatgatcttcacataggagaaatgactgttaga
gaaaccttggctttctcagcaagagtccaaggagtcgggccacgttatgacttgctagca
gaattgtcgagaagagaaaaacatgcaaatatcatgcctgatccagatattgatgtgtac
atgaaggctattgcaactgaaggccagaaggcaaatttgataacagattatgtcctaagg
attttgggactagagatatgtgctgatactgttgtaggaaatgcaatgttaagaggtatc
tctggtggacaaaagaaacgcgttacaactggggagatgttggttggaccatataaagct
ctattcatggatgaaatatctactggtttggatagctcaacaactttccaaattgtgaat
tcaatgaagcattatgtgcacattctcaaaggaaccgtggtgatctcactcctgcagcca
ccaccagagacctacaatctttttgatgacattattctactctctgatagtcacattata
taccagggtccgcgcgagcacgtacttgaatttttcgaatcaatcggttttaaatgtcct
aatagaaaaggagtagctgattttttgcaagaagtgacatcaaggaaagaccaagagcag
tactggcaacacaaagctcagccatatagatttgtcacagctgaagagttttctgatgca
tttcaatcatttcatgttggcataagacttggtgatgaacttggtactgaatttgacaag
tctaagagccatccatctgccttgacaaccaagaaatatggagttggaaaattggaactg
tataaagcttgcttatcgagggaatatttacttatgaaacgcaattcatttgtctacatc
ttcaagcttggccaagtatgtataatggcaatgattgcaatgaccatcttcttccggact
gagatgcaccatgattcagtgactcatggaggcatatatgtaggtgcattgttctttggt
gttatagtgataatgttcaatggaatggctgaaatttccatggtagtttcaaggcttcct
gttttctacaagcaaaggggatatctcttttaccctccatgggcatttgctcttcctgca
tggatcctaaaattccctttgacttttgtggaagttgctgtttgggtattcctcacctac
tatgtcattggttttgatccatatattggaagatttttgagacaataccttattcttgta
ctagtacaccagatggcttctgcattattcagattcattgcagcagttggaagggatatg
acaatggctcttacatttggatcatttgcacttgccatccttttctcaatgagtggtttt
gccctatcaaaagacaatataaaaaaatggtggatatggggattttggatatcacctatg
atgtatgcccaaaatgccatggtaaataatgagttccttgggaataaatggaaacatgtt
cttcctaactcgaaagagcctataggagttgaagttttgaaatctcgcggtttcttcact
gagtcatacttttactggatatgcgtcggtgctttgattggatatacattagttctcaac
tttggatatatacttgctctcactttcttgaatccacttgggaagcatcaaactgtcata
ccagaggggtcacagcactcaaataaagtgagaaatggcgaaattactttatccagtaga
aaagaaacagttgttgtagagacaaatcatagtaggaaaagaggaatggttcttcctttt
gaaccacattcaatcacctttgatgaagttacatattctgtagacatgccacaggaaatg
cggaaccgaggtgtgcttgaggataagttggttcttttgaagggtgtaagtggagctttc
agaccaggtgttctcactgctctaatgggaatcactggtgctggcaagacaactctgatg
gatgtactttctggtagaaaaactggtggatatatcggtggtaacgtcacaatttctggc
tttccaaaaaagcaagaaacctttgcaagaatttctggatactgtgagcaaaatgatatc
cactctccttgtgttacagtctatgaatcattgctctattcagcatggctccgattgtcc
ccaaacatcaatgctgaaactagatcgatgttcattgaggaagtcatagaacttgttgaa
ctgaaaccactgcaaaacgcattagtaggattgcctggtgttagtggtctctcaacggag
cagcgcaaaaggttgactattgcagttgagttggtagctaatccttctataatattcatg
gatgaaccaacttctgggctagatgcaagggctgctgctattgtgatgcgaacagttagg
aacacagtagacactggaagaacggttgtttgtaccatccaccaacctagcattgatgta
tttgaatcttttgatgagcttttgctacttaagcaaggagggcaagagatgtatgtaggg
ccacttggacatcattcttcgaatttaatcagttactttgagggtatccaaggtattagc
aagattaaagacggttataatccagccacatggatgttggaagtcacaacatcatctaaa
gaagtggaattagggattgattttgcagaagtgtacaaaaactcagagttgtacaggagt
aacaaggcacttatcaaagaattgagtacaccggctcctggttcgaaagatctttatttt
cattcacaatactcaagatccttttttacacaatgcatggcttgcttatggaaacaacat
tggtcttactggcgtaatcctgaatacactgtcgtaagatttctgtactcatccgcggtg
gctgttttgcttggaagcatgttttgggacctcggctccaaaattgaaagggatcaagat
ctctttaatgccatgggatccatgtatgctgctgttatcctaatcggcgtaaaaaatggt
agttcagtgcagccagtggttgcagttgaaagaacagtcttttatagagaaagagcggcc
ggaatgtattcagctttcccatatgcttttggtcaggttgtgattgagcttccatatgtg
tttgtacaatctgtggtctatggcattatagtgtatgctatgattggttttgagtggact
gtggttaaagttatgtggtgcatattctacatgtttttcaccttcctctacttcacctac
tatggcatgatgtcagtggccatgaccccaaacaatcacatttccactataatttcctct
gcattctattcagcatggaatctcttctcaggattcatagtcccaagaccgaggatacca
gtgtggtggaggtggtacagttgggcaaatccagtagcttggagtttgtatggattagtg
gcttcacaatatggagatataaaacacaacattgataccaatgatggaagacaaacagta
gaaggttttgtgagaaattactttggtttcaagcatgattttctaggagtggttgctatt
gttaatgttgcatttccaatagtttttgctttggtttttgccatatcaatcaagatgttc
aatttccaaaggcgttaa
DBGET
integrated database retrieval system
