Trifolium pratense (red clover): 123889377
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Entry
123889377 CDS
T08949
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123889377
Membrane trafficking [BR:
tpra04131
]
Autophagy
Other autophagy associated proteins
Others
123889377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_IFT140_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_SCAP
CPSF_A
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_HPS5
PEP5_VPS11_N
DUF1513
Motif
Other DBs
NCBI-GeneID:
123889377
NCBI-ProteinID:
XP_045794634
LinkDB
All DBs
Position
LG6:complement(4385464..4388563)
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AA seq
424 aa
AA seq
DB search
MATLPASPSPPWPNPNPNNPNSISIPNPNFLPDQSQTLDFDSLMSPQSQSPPHHSPTATS
PESSPTTPPLPPSLLQLSFNQDHACFAAATDNGFRIYNCDPFRELFRREFGGGGIGHVEM
LFRCNILALVGGGSHPQYPPNKVMIWDDHQGTCIGELSFRAAVRGVRLRRDRIIVVVEQK
IFVYNFADLKLLHQIETIANPKGLCAVSHLSDSLVLACPGLHKGQIRVEHFAQKKTKFIS
AHDSRIASFALTLDGQLIATASVKGTLIRIYDTDNGTLLQEVRRGANAAEIFSLAFSSTA
QWLAVSSDKGTVHVFGLKVNSSVSENEKSQGSSSSDATVPPSSSSRSFIKFKGVLPKYFN
SEWSVARFHLHEGTQYTVAFGLQKNTVIILGMDGSFYRCQFDPAHGGEMTQLEYQNFLIP
ETAL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttcctgcttctccttcaccaccatggccaaaccctaaccctaataatccc
aattctatttctattccaaaccctaatttcctccccgatcaatctcaaaccctcgacttc
gattcccttatgtctccccaatctcaatcaccgccacaccactctcccaccgccacttca
ccggaatcttcccccaccacaccgccacttcctccatcgttacttcaactctcatttaac
caagaccacgcctgcttcgccgccgcaactgacaacggcttccgcatctacaactgcgat
cctttccgtgaactcttccgccgtgaattcggcggtggaggaatcggtcatgtagagatg
cttttccgatgtaatatattagcacttgtcggaggtgggtcccaccctcagtatcctcct
aataaagtcatgatctgggatgatcatcaaggtacttgcatcggtgagctttcgttccgt
gctgccgttcgcggtgttcggcttcggagggataggataattgttgtggtggagcagaag
atatttgtgtataattttgctgacttgaaacttttgcatcagattgaaactattgcaaac
cctaaagggctttgtgcagtttcacacttgtctgattctcttgttcttgcttgtcctggt
ttgcataagggtcagattcgtgttgagcattttgcacagaagaagactaagttcatttct
gctcatgattcaaggatagcttcctttgctctcactcttgatggacagttaatcgctacc
gccagtgtcaagggcacgctgattcggatttatgataccgataatggcacgctacttcaa
gaagtgagaaggggtgcaaatgcagcagagatatttagtttggcgttttcttcgactgct
cagtggttagcagtttcaagtgacaagggtactgtccatgtttttggccttaaggttaat
tcaagtgtctctgagaatgaaaagtcacaaggttcgtcaagttcagatgctaccgttccc
ccatctagctcgtctcgctctttcattaaatttaaaggagtgttgcccaagtatttcaac
tcagagtggtcagttgctcggtttcacttacacgaaggcactcagtacacagttgcattt
ggtctccaaaagaatacagtcataattcttggcatggatggaagcttctataggtgccaa
ttcgatccggcacatggaggtgaaatgacccagctggaatatcaaaactttttaattcca
gagacagccttgtga
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integrated database retrieval system
