Trifolium pratense (red clover): 123889386
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Entry
123889386 CDS
T08949
Name
(RefSeq) nuclear matrix constituent protein 1 isoform X1
KO
K27866
protein CROWDED NUCLEI
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123889386
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
123889386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2388
Motif
Other DBs
NCBI-GeneID:
123889386
NCBI-ProteinID:
XP_045794644
LinkDB
All DBs
Position
LG6:31948512..31955205
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AA seq
1174 aa
AA seq
DB search
MFTPQRLWSGPGNTPNKSGARGVTGSGLVSGDVSGSKGKGIAVVENGGNLDREVLVERVT
SLEKELYEYQFNMGLLLIEKKEWNSKYNDLNQDLVEVKDALEREKAAHLFALSEAEKREE
NLRKALGVEKECVLDLEKALREMRSEHAKIKFAADSKLAEANALIASVEEKSLEVEAKLR
SADAKLAEINRKSSEVDRKSHDLEAQESALRRERLSFIAEQESHESNLSKQREDLREWEK
KLQDGEERLAKGQKILNEREQRANEIDRICRQKGQDLEEAQKNIDAANVTLRSKEDDVNS
RLAAITLNEKECDSMRLKLDLKEKELSEWEEKLNAREKVEIQKLVDEHSAVLDVKKQEFE
SELDEQRKSFEEGLRNRLVEVEKKEGEVNHTEEKVAKREQALEKKAEKLKEKENEYEVKV
KALKEREKSIMSEENDLGKEKDKIESEREELLNLKAEVEKLRANNEEELLRINEETNRLQ
VTEEERSDYLRLQSQLKHEIDQYRLQKELLIKEADDLRQQKETFEREWDELDLKRADVEK
ELKNVLQQKEDILKLQQNEEEKLNNEKKATEDYLQRELETLKLAKESFAAEMELEKLSLA
EKAQNEKNQMLLDFEMRRKELEADMQNQLEQKEKDLLETRKLFEEKRESELSNINFLREV
ANREMEEMKHQRSKLEKEKQDADENRKHVESQRIEIQEDIDVLVDLNKKLKNQREQFIKE
RRRFIDVVEKLRSCQNCGEMISEFVLSDLQSSADIENLEVPSLPKLAGDITQGGSDINLD
SSRQNTGVSPANDTKSPVLGGTVSWLRKCSKIFKISPIKKIESDVDSLRDVDTLPIKNTN
EDSPANIPGTENEAELSFAIANDSFDALRVQNDNDITEVEADHDPSIDNQGNIETNTPDD
LQLPDSKVGQQKPGRGRGRARVKRTQTVKAVLKEAEAILGKSKAAEAVPGESVDDRETDF
PNGNAEDSANMDSESQKPSGKRSTANLRKRNRVQTSQVTASEHEGDASEGHSDIPGQRKK
RRQKAAAPPSQTAGETRYNLRRPKTGATTSSVRGVSGGGKESEGEVGRVKDGGATTSHSV
GITNEDGGGIGHDQKVGETQDGYTRTFASNMAVSEEVNGTADDAAENHDAEYKSESRGED
AGPVDDDDENEFDEDYQHPGETSVGKKFWKFLTT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgccgcagagattatggtcgggtccgggaaacacgccgaacaaaagtggagcg
cgtggtgtaaccgggtcgggtcttgtttcgggtgatgtgagtggttctaaagggaaaggt
attgctgttgttgaaaatggtggaaatttggatcgtgaggttttggttgagagggttaca
agccttgagaaagagctttatgagtaccaattcaatatggggcttctcttgattgagaaa
aaggagtggaactctaagtataatgatctcaatcaagatttagtggaagtcaaggatgct
ttggaacgagaaaaagcagctcatttatttgctctatccgaggcagaaaagcgagaagag
aatttgaggaaggccttgggtgttgagaaagagtgtgtgcttgatctcgagaaggctctg
cgagaaatgcggtcagagcatgcaaagattaaatttgcagctgactcgaagttagctgaa
gctaatgctttaatagcaagcgttgaagagaaatctttagaagttgaagccaagttacgc
tctgctgatgccaaacttgctgaaatcaaccgaaagagttcagaggttgatcggaaatca
catgatctcgaggctcaggaatctgcacttagaagggaacgtctatccttcattgcagag
caagaatctcatgagagtaatttgtctaagcaaagagaggacttacgagaatgggagaag
aaactacaggatggagaagagagattggccaagggtcaaaaaattctcaatgaaagagag
cagagggctaatgagattgacagaatatgtcggcagaaagggcaggaccttgaagaggca
caaaagaacattgatgcagcaaatgtaacattgagaagcaaagaagatgatgtaaacagc
aggctcgcagctataaccctaaatgagaaggaatgtgattctatgagattgaaattggat
ctcaaagagaaggagctatctgaatgggaggaaaaactgaatgccagagaaaaggttgag
attcagaagcttgttgacgaacacagcgctgtccttgatgtgaagaagcaggagtttgag
agtgaattggatgaacaaagaaaatcatttgaagagggattgaggaatagattggtagaa
gtggaaaagaaagaaggtgaagtgaatcacacagaggagaaggttgcaaaacgggagcag
gctttggaaaagaaagctgaaaagctcaaggagaaagagaatgaatatgaagtaaaagtc
aaagctttgaaggaaagggagaagtctattatgtctgaggaaaacgacttggggaaggag
aaggataaaatagaaagtgagagagaggaattgctcaacctcaaagctgaagttgagaaa
ttaagggccaacaatgaagaagagttgttgagaattaatgaagagactaatcgccttcaa
gtgaccgaggaggagaggtctgattatttacgtttgcagtcacaactgaagcatgaaatt
gatcagtataggcttcagaaagaactgctgattaaggaagctgatgatttgaggcagcaa
aaagagactttcgaaagagaatgggatgagcttgatctaaagagagcagatgtggagaaa
gagctgaaaaatgtgcttcaacagaaagaagacattttaaaactacaacaaaatgaagaa
gagaagttaaataatgagaaaaaggccacagaagactatctacaaagggaattggaaact
cttaagttggctaaagagtcatttgctgctgaaatggagttggaaaagttaagcctagct
gaaaaagctcaaaatgagaaaaatcaaatgcttctggattttgagatgcggagaaaagaa
cttgaagctgatatgcagaatcagttagagcagaaggaaaaagacttacttgaaacaagg
aagttattcgaagagaagagagagagtgaattaagcaatatcaatttcttgagagaagtg
gctaatagagaaatggaagaaatgaaacatcaaagaagtaaattagagaaggagaaacaa
gatgcagatgagaatagaaaacatgttgaaagccaaaggatagaaatacaagaggacata
gatgtactggttgacctcaacaagaagctgaaaaatcagcgggaacaatttattaaggag
agacgtcgctttattgatgttgttgagaaacttcggagttgccagaactgtggcgaaatg
atttctgaatttgtgctgtctgatttacaatcttctgctgacattgagaatttagaggtg
ccctctcttccaaaattggctggtgatattacacagggtggttctgatataaatcttgat
tcttctaggcaaaatactggagtatcccctgcaaatgatacaaagtcccctgttcttggt
ggaactgtctcttggctacgtaaatgctctaagattttcaagatctctcccattaaaaag
attgaatctgatgttgacagtttaagggatgtggataccttgccaattaagaataccaat
gaagattcaccagcaaacattcctggcaccgagaatgaagcagagttgtcttttgcaatt
gcgaatgattcttttgatgctctgagggtacagaatgacaatgatatcacagaggttgaa
gcagaccatgatccttctattgacaaccagggcaacattgaaactaacacaccagatgat
ttacagcttcccgattcaaaggttgggcagcagaaacctggcaggggaaggggaagggcc
agagtaaagcgcacacaaactgtaaaagcagttctcaaagaggctgaagctattcttggg
aaatcgaaagctgctgaggcagtacctggggaatctgtggatgatcgtgagactgatttt
ccaaatggaaatgccgaggattcggccaacatggattctgaaagtcagaaaccatccggc
aaaagatcaacggctaatttgcggaagcgaaaccgggttcaaacatctcaagttactgct
agtgagcatgaaggggatgccagtgaagggcattctgatataccaggacagcgcaaaaag
aggcgacagaaggctgctgctcctccttcacaaactgctggtgaaacaagatacaatttg
aggcgacctaaaactggagcaacaacttcatctgttcgaggtgtgtctggtggcggcaaa
gagagtgagggtgaggttggacgtgtaaaagacggaggagcaacaacttcacattcagtt
ggcattactaatgaggatggtggcggcataggtcacgatcagaaggtaggggagacgcag
gatggttatacaaggacatttgccagcaacatggctgtgagtgaggaggtgaacggaaca
gcagatgacgcggcggagaatcatgatgccgagtataagagtgaatcccgtggagaagat
gcaggcccagtcgacgacgatgatgagaatgagtttgatgaagattaccaacatcctggt
gaaacttcagtggggaagaagttctggaaattcttaacaacataa
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