Trifolium pratense (red clover): 123889416
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Entry
123889416 CDS
T08949
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123889416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123889416
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123889416
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
AAA
AAA_28
ABC2_membrane_3
nSTAND3
DO-GTPase2
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
123889416
NCBI-ProteinID:
XP_045794713
LinkDB
All DBs
Position
LG6:complement(35876480..35884401)
Genome browser
AA seq
1483 aa
AA seq
DB search
MEGGSSFRIGSSSIWRNNDVDEIFSNSFHQEDDEEALKWAAIQKLPTFARLRKGLLTSLQ
GEAKEIDIENLGLQERRGLLERLVRLAEEDNEKFLLKLKKRIDRVGIDLPTIEVRFENLN
IEAEARVGSRSLPTFTNFMVNIVEGLLNSLHVLPSRKQHLNILKDVSGIIKPSRMTLLLG
PPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHEMNEFVPQRTSAYVDQHDLHIGEMTVRE
TLAFSARVQGVGPRYDLLAELSRREKHANIMPDPDIDVYMKAIATEGQKTNLITDYVLRV
LGLEICADTYVGNAMLRGISGGQRKRVTTGEMLVGPYKALFMDEISTGLDSSTTFQIVNS
MKQYVHILKGTVVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLEFFESMGFKCPN
RKGVADFLQEVTSRKDQEQYWEHKDQPYRFVTAEEFSDAFQSFHVGRRLGDELGNEFDKS
KSHPSALTTKKYGVGQWELYKALLSREYLLMKRNSFVYIFKLCQLSIMAMVAMTIFFRTE
MHRDSVTHGGIYVGALFYGVVVIMFNGMAEISMVVSRLPVFYKQRGYLFYPPWAFALPSW
ILKIPLTFVEVAVWVFLTYYVIGFDPYIGRLFRQYLILVLVHQMASGLFRFIAAVGRDMT
VALTFGSFVLATLFAMSGFVLSKDSIKKGWIWGFWISPMMYGQNAMVNNEFLGNSWKHVL
PNSTEPLGVEVLKSRGYFTESYWYWIGVVALIGYTLVFNFGYILALTFLNRECLPLRCII
KQTRLVHELIYEKNYYTALGKHQTVIPEESQNNEQNGGSRKRTNVLKFIKDSFSQHSNRV
RNGECTSGSVSPSTLSTRQETVAAETNHSRKRGMVLPFEPHSITFDEVTYSVDMPQEMRN
RGVVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYIDGNITISGYP
KKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDINAETRKMFIEEVMELVELK
PLRNALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT
VDTGRTVVCTIHQPSIDIFESFDELLLLKQGGQETYMGPLGHHSSNLIGYFEGIEGVSKI
KDGYNPATWMLEVTTSSKEVELGIDFAQVYKNSELYRRNKALIEELSTPASGSKDLYFHS
QYSRSFLTQCMACLWKQHWSYWRNPLYTAIRFLYSTMVAVLLGTMFWNLGSKIEKERDLF
NAMGSMYAAVLLIGIKNSTSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVVIELPYVFV
QSVVYGFIVYAMIGFEWHVAKVLWFLFFMYFTFLYFTYYGMMAVAVTPNNHISTIVSSAF
YSVWNLFSGFVIPRPRIPVWWRWYSWINPVAWSLYGLVASQYGDVKHNIDANDGRQTVEG
FVRNYFGFKHDFLGVVAVVNVAFPIAFALVFAISIKMFNFQRR
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggaagtagtttcaggataggtagttcatcaatttggaggaacaatgatgtt
gatgagattttttcaaattctttccaccaagaagatgatgaagaagctcttaaatgggct
gcaattcagaaacttcctacttttgcgcgtttgaggaaaggtttgctcacttcacttcaa
ggtgaagccaaggagattgatatcgagaaccttgggttgcaagaaaggagaggtttgctt
gaaagacttgttagacttgctgaagaggacaatgagaagtttttgctcaaactcaaaaaa
cgaatcgacagagttggaattgatcttcctacgatagaggttcgattcgagaatttgaat
atcgaagcagaagctcgtgtaggaagcagatctttgcctaccttcactaacttcatggtt
aatatagttgagggcctattgaactctctgcatgtacttccaagtagaaaacaacattta
aatattctgaaggatgttagtggaataataaagccttcaagaatgacattgcttttgggc
cctccaagttctggaaaaactacactcctgttggccttggctggaaaacttgatccaaaa
ttgaagttttctggaaaggtgacttataatggtcacgagatgaatgagtttgtgccccaa
agaacatctgcttatgtagatcaacatgatcttcacattggagaaatgactgttagagaa
accttggccttctcagcaagagtccaaggagtcgggcctcgttatgatttgctagctgaa
ctgtccagaagagaaaaacatgcaaatatcatgcctgatccagatattgatgtgtacatg
aaggctatagcaactgaaggccagaagacaaatttgataacagattatgtcctaagggtt
ttgggattagagatttgtgctgatacttatgtaggaaatgcaatgttaagaggtatttct
gggggacaaagaaaacgcgttacaacaggggagatgttggttggaccgtataaagctcta
ttcatggatgaaatatctactggtttggatagctcaacaacttttcaaattgtgaattca
atgaagcaatatgtccacattctcaaaggaactgtggttatctcactcctgcagccacca
ccagagacttacaatctttttgatgacattattctactctctgatagtcacattatatac
cagggtccccgcgagcacgtgcttgaatttttcgaatcaatgggttttaaatgtcctaac
aggaaaggagtggcagactttttgcaagaagtgacatcaaggaaagatcaagagcagtac
tgggaacacaaagatcagccatatagatttgtcacagcggaagagttttctgatgcattt
caatcatttcatgttggcagaagacttggtgatgaacttggtaatgaatttgacaagtct
aagagccatccatctgccttgacaaccaagaaatatggcgtgggacaatgggaactgtat
aaagctctcttatcaagagaatatttacttatgaagcgcaattcatttgtctacatcttc
aagctttgccaactatctataatggcaatggttgcgatgactatcttcttccgcactgag
atgcacagagattctgtgactcatggaggcatatatgtaggtgcattgttctatggtgtt
gtagtgatcatgttcaatggaatggctgaaatttccatggtagtttcaaggcttcctgtt
ttctacaagcaaaggggatatctcttttaccctccatgggcatttgctcttccttcatgg
atcctaaaaatccctttgacttttgtggaagttgctgtttgggtattcctcacctactat
gtcattggtttcgatccatatattggaagacttttcagacaataccttatccttgtacta
gtgcaccagatggcttctggattattcagattcattgcagcagttgggagagatatgaca
gttgctttaacatttggatcatttgtacttgccaccctttttgctatgagtggttttgtc
ctatcaaaagatagtataaaaaaagggtggatatggggattttggatatcacctatgatg
tatggacaaaatgccatggtcaataatgagttccttggtaatagctggaaacatgttctt
cctaactcaacggagccactaggagttgaagttttgaaatctcgcgggtacttcaccgag
tcatactggtactggattggtgtggttgctttgattggatatacattagttttcaacttt
ggctatatccttgctctcactttcttgaatcgtgagtgtcttccccttagatgtataata
aaacaaacaagattagttcatgaactaatatacgaaaaaaattattatacagcacttgga
aagcatcaaactgttattccggaggaatctcaaaacaatgagcaaaatggtggtagcaga
aaaagaactaatgtattgaagttcataaaggatagcttttcacagcactcaaatagagtg
agaaacggcgaatgtacaagtggaagcgtctctcctagcactttatctactagacaagaa
acagtcgctgcagagacaaatcatagtaggaaacgaggaatggttcttccttttgaacca
cattcaatcaccttcgatgaagttacatattctgtagacatgccgcaggaaatgagaaac
cgaggtgttgttgaggacaagttagttcttttgaaaggtgtcagtggagctttcagacca
ggggttctcactgctctaatgggtgtgactggtgccggaaaaacaactctgatggatgtg
ctggctggtagaaaaactggtggatatatcgatgggaacatcacaatatctggttatcca
aagaagcaagaaacatttgcaaggatttctggatactgtgagcaaaatgatatccactct
cctcatgttactgtctatgagtccttgctctattcagcatggctccgattgtcccccgat
atcaatgctgaaacccggaagatgttcattgaggaagttatggaacttgtggaattgaaa
ccactacgaaacgcattagtaggactgcctggtgttagcggtctctcgacagagcagcgc
aaaaggttgactattgcagttgagttggtagccaatccgtctataatattcatggatgaa
ccaacttctggactagatgcaagggctgcagctattgtgatgagaacagttaggaacaca
gtagacactggaagaacggttgtttgtacaatccaccagcctagtattgatatatttgaa
tcttttgatgagcttttgctacttaagcaaggagggcaagagacttatatggggccactt
ggacatcattcttctaatttaatcggttattttgaaggaatcgaaggtgtaagcaaaatt
aaagacggctataatccagcaacatggatgttagaagtcacaacttcatctaaagaagtg
gaattggggattgattttgcacaagtgtacaaaaattcagaattatacaggagaaacaaa
gcacttatcgaagaattgagtactccagcttctggttcaaaagatctttattttcattca
cagtactcaagatcgtttttgacacaatgcatggcttgcttatggaaacaacattggtct
tattggcgcaatcctctatataccgccataagatttctgtactcaaccatggtagctgtt
ttgcttggaaccatgttttggaaccttggctccaaaattgaaaaggaacgagatcttttt
aatgccatggggtccatgtatgctgctgttctcttaatcggcatcaagaattctacttcg
gtgcagccagtggtttctgtagaacgaacggtcttttatagagaaagagcagccggaatg
tattcagctttcccatatgcatttggtcaggttgtaatcgagcttccatatgtttttgta
caatccgtggtctatggatttatagtttatgctatgattggttttgagtggcatgtggct
aaagttttgtggttcctattcttcatgtatttcaccttcctctatttcacctactatggc
atgatggcagtggctgtgaccccgaacaaccacatatcgactatagtttcctctgcattc
tattctgtatggaatctcttctcaggattcgtaatcccaagaccaaggattccagtgtgg
tggaggtggtacagttggataaatccagtggcttggagtttgtatggattagtggcttca
caatatggagatgtaaaacacaacattgatgccaatgatggaagacaaacggtagaaggt
tttgtgagaaattactttggtttcaagcatgattttctaggagtggttgctgttgttaat
gttgcatttccaatagcttttgctttggtctttgccatatcaatcaagatgttcaatttc
caaaggcgttaa
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