Trifolium pratense (red clover): 123889556
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Entry
123889556 CDS
T08949
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123889556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123889556
Spliceosome [BR:
tpra03041
]
Complex C
Other components
Step II factors
123889556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
123889556
NCBI-ProteinID:
XP_045794898
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Position
LG6:483221..488314
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AA seq
536 aa
AA seq
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MATASVAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIFQANKYRKGACENCGAMTHVSKACMERPRKVGAKH
TNKHIAADEKVETFELDYDGKRDRWNGYDSSTYARVIERYEARDDARKKFLKEKQLEKLE
KGDQNDEGAAIDEAEDDDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLEVNSSHYDPKTRSMREDPLPEADPNEKFYLGDNQYRNSGQALEFKELNI
HAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKETIIEKYGNAADEDKLPREL
LLGQSERQVEYDRAGRIIKGQEAAIPRSKYDEDVYINNHTTVWGSWWKDHQWGFKCCKQT
IRNSYCTGAAGIEAAEAASDLMRANIARKEAAAEDPTPAEDKRPATWGTDVPDDLVLDDK
LLADALKKEDQRKREEKDERKRKYNVRWNDEVTQEDMEAYRMKKVHHDDPMSKFMN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcttcagttgcattcaaatccagggaagatcataggaaacagatcgaactc
gaggaagcccgtaaggccgggcttgcacctgctgagcttgatgaagatggcaaggaaatc
aatccccatattcctcagtatatgtcctccgcaccttggtatcttaacgctgagagaccc
agtttgaaacatcaaaggaaatggaagtctgatcccaattacacaaaatcatggtacgat
agaggtgccaaaatatttcaggccaacaagtacaggaaaggtgcctgtgagaattgcgga
gctatgacacatgtttccaaggcatgcatggaaagaccacggaaagtaggagcaaaacat
acaaacaagcacattgctgctgatgaaaaggtagaaacttttgagcttgactatgatggc
aaacgggacagatggaatgggtatgattcgtcaacgtacgctcgagttattgagaggtac
gaagccagagatgacgctcgtaagaagttcttgaaggaaaaacagctggagaaattggag
aagggcgaccaaaatgatgagggtgctgcaattgatgaggctgaagatgatgatgaagat
gatttaagggtagatgaggcaaaggttgatgaaagcaaacaaatggactttgcaaaggtt
gagaagcgtgtgcgaacaacaggtggtgggagtacaggaactgtgaggaacctacgtatt
cgagaggatactgcaaaatatcttctcaatcttgaagtcaattcttcacattatgatccc
aagaccaggtccatgcgtgaagatcctctcccagaggcagatccaaatgaaaagttttac
ttgggtgataaccaatatagaaatagtggtcaagctttggaattcaaggagttaaacatc
catgcttgggaagcatttgacaagggacaagatgttcatatgcaagcagctccttcccaa
gctgaattgctctataagaatttcaaggtcatgaaggagaaattgaagtctcagacgaag
gaaactattattgagaagtatggcaatgcagctgacgaggacaagcttccaagagaactt
ctgctgggtcagagtgagaggcaagttgagtatgatcgtgctggtagaattattaaggga
caggaagctgcaatccccagaagcaagtatgacgaagatgtttacattaacaaccacaca
actgtttggggctcatggtggaaggatcaccaatggggttttaagtgctgcaaacagaca
atacgtaatagctattgcactggtgctgctggtattgaggctgctgaggctgcaagtgat
ctcatgagagctaatattgcacgcaaggaggctgctgcagaggatccgacaccagcagaa
gacaaaaggcctgctacatggggaactgatgtaccagacgacctagttctggatgataaa
ttgcttgctgacgcactcaaaaaggaggatcaaagaaagagagaagagaaagatgagagg
aagcggaaatataatgttagatggaatgatgaggttactcaagaagacatggaggcatac
aggatgaagaaagttcatcatgatgacccgatgagtaaattcatgaactaa
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