Trifolium pratense (red clover): 123889579
Help
Entry
123889579 CDS
T08949
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123889579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123889579
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123889579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
123889579
NCBI-ProteinID:
XP_045794934
LinkDB
All DBs
Position
LG6:complement(623678..628571)
Genome browser
AA seq
718 aa
AA seq
DB search
MNGKGHKFVRFEDWRSESSFSIELKDSVNKRNERPSVSSILKNIGRGLESGLEKMKKFRR
PSSAVHPVNERQTKKSASSKRIILDPQGPMLQKWNKIFVITCVMAISVDPLFFYIPVIVG
NDKCLDLDEPLQTTASVLRTFFDLFYILRIIFQFRTGFIAPSSRVFGRGELVDDPIAIMK
RYLSSHFIIDILSIIPLPQVIVLAVIPKLKSTGPFLAKDLLKVTVLIQYVPRLLRIRPLF
QEVTRTSGILAETAWAGAVFNLLLYMLASHVVGANWYLLSIESQVRCWRRQMNNASLFHA
SYLGCGNRNESVFLLLNNTCNFVDPDDIKDTKIFNFGIFSDALQSQVIDSTTEFPQKFFY
CFWWGLRNLSSLGQNLKTSTYVPEIAFAIFIAIFGLVLFSLLIGNMQKYLQSTTVRVEEM
RVKRRDAERWMSHRMLPDNLKQRIRSYEQYKWQENRGVEEETLIRNLPKDLRRDIKRHLC
LALVKKVPMFEKMDEQLLDAMCDRLKPVLYTEKSCIVREEDPVDEMIFIMRGKVATMTTN
GGRTGFFNSLFLMPGDFCGEELLTWALDPNSSSNLPTSTRTVETISEVEAFALMADDLKF
VASQFRRLINSKQLQHTFRLYSPQWKTWAVCFIQAAWRRYWKKKIERTLREAEDKLQDVL
ANEEGSTISLGATIYASRFAANALRNLRENNRHNRMPQRLLPLLPPKPAEPDFTTKKH
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaaaggacataaatttgtgaggtttgaggattggagatcagagtcgtcgttt
agcatagagctgaaagattctgtaaacaaaagaaacgagagaccaagtgtaagttctatt
ttgaagaacattggaagaggacttgagagtggattagagaagatgaagaaattcagaaga
ccgtcttcagcagttcatccagtaaatgaaagacaaacaaaaaaatcggcttcttctaag
cgcataattcttgatccacaggggccaatgcttcagaaatggaacaaaatctttgtaatc
acatgtgttatggcaatttctgtggaccctcttttcttttacattccggtgattgtcgga
aacgacaaatgtcttgatttggatgaaccgttgcagactactgccagtgttcttcgcaca
ttctttgatcttttctacattcttcgcatcatctttcagtttagaactgggtttattgca
ccttcttctcgtgtttttggaagaggtgaactcgttgacgatcctattgccataatgaaa
cgatatctgagttctcatttcatcattgacattctttcaattattccccttccacaggtt
attgttttggctgttattccaaaattgaaaagcacgggtccatttttggcaaaggatttg
ttgaaggttacagtattaattcagtatgtgccgagactattgcggattcgtccactattt
caagaagtaactagaacttcaggcatattggcggagacagcgtgggctggagctgtcttc
aatcttttactctacatgctagccagtcatgtggttggagctaactggtatctgctttca
atagaatcacaagtgcggtgttggcgcagacagatgaacaatgcttccctctttcatgca
tcatatttgggctgtggaaatcgaaatgaaagtgtcttcctactactcaataatacatgt
aattttgttgaccctgatgatatcaaggacacaaaaatcttcaattttggaatattttcc
gatgctctacaatcacaagtgatagattctaccacagaatttcctcagaagttcttctac
tgcttttggtggggtttgcgcaatttaagttctcttggacaaaacctcaagacaagtact
tacgtcccggagatagcttttgcaattttcattgccatctttggattggttttattctca
ttacttattggaaacatgcagaaatatttgcaatctacaactgttagggtagaagagatg
agagtgaagaggagggatgcagaacgatggatgtctcaccgtatgttacctgataacttg
aagcaaagaattagaagttatgaacaatacaaatggcaagaaaatagaggtgttgaagaa
gagactttaattcgcaacctccctaaagatcttagaagagacataaagcgtcatctttgc
ttagctttagttaaaaaagtgccaatgtttgagaaaatggacgagcaattgttggatgca
atgtgtgatagattgaaaccagttctgtatacagagaagagttgcattgtccgtgaagaa
gatccggttgatgaaatgattttcattatgcgtggaaaagtcgctaccatgacaacaaat
ggtggaagaactggtttcttcaactcattatttctaatgcctggtgatttttgtggagaa
gaacttttaacatgggctttggatccaaactcttcctcaaatctaccaacttcaactaga
acagtagaaactatatcagaagttgaagcatttgcactcatggctgatgatttgaagttt
gttgcttcccaatttcgacgtcttatcaatagcaaacaacttcaacacactttcaggtta
tattcgccgcaatggaagacatgggctgtatgtttcatacaagcagcttggcgtcgatac
tggaaaaagaagattgagaggacattacgtgaagccgaagacaagctacaagatgttcta
gccaacgaggaagggtcaactataagccttggtgcaaccatatatgcatcaaggtttgct
gcaaatgcattacgaaacttgagagaaaataacagacacaaccgaatgccgcagagattg
ttacctcttttgccaccaaaaccagctgagcctgatttcactactaagaaacactag
DBGET
integrated database retrieval system
