Trifolium pratense (red clover): 123889633
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Entry
123889633 CDS
T08949
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123889633
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123889633
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123889633
03036 Chromosome and associated proteins [BR:
tpra03036
]
123889633
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123889633
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123889633
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123889633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
123889633
NCBI-ProteinID:
XP_045795006
LinkDB
All DBs
Position
LG6:complement(1148954..1157136)
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AA seq
535 aa
AA seq
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MEVVTDAASLDVELLQLPDVSTLFLKSNLTFVETLFDQWLSVPDSNRLVTSLLNDAKSGV
PLNVPGNCSSPNASSNSLPSMFPAGTAPPLSPRSSSGSPRILKQRVGPSNLGSSLKVVSE
PVRELIPQFYFQDGRPPPNELKEQCMLRIDHLFPDQSHGLQIHEFKSVTKEICKLPSFLS
TSLYRKIENGAGIVTRKAFIDYWINGNLLTKDIGTQIYTILKQPQLNYLTQDDFKPILRE
LLATHPGLEFLQSTPEFQERYAETVIHRIFYYINRSGTGRLTLRELKRGNIIDAMQHADE
EEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVP
RKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCVDLDGNGVLTRNELQFFYEEQL
HRMECMAQEPVLFEDILCQIIDMVKSENESYITLRDLKGGKLSGSVFNILFNLNKFMAFE
TRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDVSNGSAEVWDESLEAPF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgttaccgatgcggcgtctttggatgttgaattgttgcagctaccagatgta
tctactttgtttcttaagtctaatctcaccttcgttgagacgcttttcgatcaatggctt
tcggttcctgatagcaatcgtctcgtaacatcattgctaaatgatgcaaaatccggtgtt
ccgttgaatgtcccggggaattgctcaagtccaaatgcttcgagcaattctttgccttct
atgtttcctgctggcaccgcaccacctctttcaccgagaagttcatccggttcccctcgc
atattgaaacagagagttggaccttctaatttgggttcttctttaaaagttgttagcgag
cctgttagagaacttatacctcagttctacttccaagatgggcgtcctcctcccaatgaa
ctgaaagaacaatgcatgcttagaattgaccatttattccctgatcagtcacatgggctg
cagatacatgaattcaagtcagttaccaaggaaatatgcaagctgccatcttttctttcc
acatctctttacagaaagatcgaaaatggagctggtattgtgacaaggaaagcatttatt
gattattggattaatggcaacttgttgacgaaggatatagggacccaaatatacacaatt
ttaaagcaaccacagctcaattaccttactcaggatgattttaaacctatactacgtgag
cttttggcaactcatcctgggctggagttcctgcagagcacacctgagtttcaagagaga
tatgctgaaactgtgatacacagaatattttactacatcaatagatcaggaactggtcgt
cttaccctgagggagctgaagcgtggaaacataattgatgcaatgcagcatgccgatgaa
gaagaagacatcaacaaagttttgagatacttctcttacgagcacttttatgttatatac
tgcaagttttgggagctggatacagatcatgatttcctgatagacaaagagaatcttatc
agatatggtaaccacgcacttacctatcgaattgtcgatagaatattttctcaggtccca
agaaaatttactagtaaagttgagggaaagatgggatatgaagattttgtttacttcata
ctagcagaagaggataaatcatctgagccaagtcttgaatattggtttaagtgtgttgat
ttggatgggaacggagttctaacacggaatgaactgcaatttttttacgaggagcaactg
catcgaatggagtgcatggctcaggaacctgtgctttttgaggatatattgtgccagata
attgacatggttaaatccgagaacgaaagctatatcactctgcgtgacctgaaaggtgga
aagctctctggaagtgttttcaatatcctgttcaatctaaataagttcatggcctttgaa
actcgtgacccatttttgattcgccaggaacgtgagaatcctacgttgacagagtgggat
cgctttgctcacagagaatatattaggctttcaatggaagaagatgtagaggatgtttct
aatggaagtgcagaagtttgggatgaatcactagaggctcccttctga
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