Trifolium pratense (red clover): 123889634
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Entry
123889634 CDS
T08949
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123889634
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123889634
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123889634
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123889634
03041 Spliceosome [BR:
tpra03041
]
123889634
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
123889634
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
123889634
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123889634
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123889634
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123889634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
123889634
NCBI-ProteinID:
XP_045795007
LinkDB
All DBs
Position
LG6:1139350..1143760
Genome browser
AA seq
326 aa
AA seq
DB search
MEQSVVDDIINRLLEVRHRPGKQVQLSEAEIRQLCVVSRDIFLQQPYLLELEAPIKICGD
VHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGISPDLHNLD
QIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADTISEFLQKHDLDLI
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKKTK
LNFGSTTTAKPGNSPAGVKSFLGAKV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatcagttgttgatgacataatcaatcggttgttagaagttcgacaccgtcca
gggaagcaagtccaactatcggaggctgagatccgtcaactctgtgtagtttctagagac
atttttcttcaacaaccttatttattagaactcgaagcacctatcaaaatttgtggtgat
gtacatggtcaatattctgatcttttaaggctatttgagtatggtggattgcctcccgag
gctaactacttgtttttgggggattatgtggatcgggggaagcagagtttagaaacaatt
tgccttctccttgcttataagattaaatatcctgaaaactttttcttattgagaggaaat
catgagtgtgcttctataaatcggatttatggattttatgatgagtgcaagagaaggttt
aatgtaaggttatggaagacatttacagactgcttcaattgccttcctgtggcagccctt
attgatgaaaagattctgtgtatgcatggggggatttctcctgacttgcataatttggat
cagataagaaatctacaacggcccaccgatgttcctgatacaggtttgctttgtgatctt
ctatggtctgacccaagcaaagatgttcaaggatggggaatgaatgacaggggagtttca
tatacatttggtgctgataccatctcagagtttcttcagaaacatgatcttgacctaatt
tgccgtgctcatcaggttgtggaggatggatatgagttctttgctaacagacagctcgta
acaatattttcagcacctaattattgtggggagtttgacaatgccggtgctatgatgagt
gttgatgatacactaatgtgctctttccaaatattaaagcccgctgataaaaaaacaaag
ctcaattttggaagtacaaccactgctaaacctggaaactctcccgcaggtgtaaagtcc
ttccttggcgcaaaagtatga
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