Trifolium pratense (red clover): 123889844
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Entry
123889844 CDS
T08949
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123889844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123889844
03036 Chromosome and associated proteins [BR:
tpra03036
]
123889844
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
123889844
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
123889844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Ge1_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_SPT8
RMC1_N
Beta-prop_SCAP
CFAP43_N
Beta-prop_IFT122_1st
WDR54
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
123889844
NCBI-ProteinID:
XP_045795305
LinkDB
All DBs
Position
LG6:18994756..18996387
Genome browser
AA seq
427 aa
AA seq
DB search
MNSRYQKENLDRFIPNRSAMDFGYALSMLTEPHRKKVNSSAPITASSEAYRRALVDAANL
PTRILAFRNKPLNPRNVDVPLSPPRCKPPKPKRHIPKHCEGRFKVPAMRDDFSLNLLDWS
KKNVVTLAMDTRVLIWNPSMKTNTSAEIVDDHEEGFFTSVCWSPDGRFITIGLDNSTVQI
WDAFSPKPRKGIEGWHSGIVGSLVWNGPILTTGGTDGRIVNHDVRVRSHIVGSVRGHKQG
VCGLKWSPSGTQLASGGNDNVVRIWDISVDSSDSRSTGWPHRFEEHTTSVRALSWCPFEN
NLLASGGGEGDHCIKMWNTRTGACLNSVDTGSQVCALAWNKNERELLSSHGFPHNQLTLW
MYPSMLKMGELNDHTSRVLYMAQSPDGCTVATASGDKTLRFWNVFETPTAAPIKKYESYP
FSDFNIH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgcgataccaaaaagaaaacttagacagattcatcccaaatagatcagccatg
gatttcggttacgctctctccatgctcactgaaccccaccggaaaaaggttaactcatcg
gcgccgatcacggcgtccagcgaagcctaccggagagcactcgtcgatgctgctaatctc
ccaactagaatcttagccttccgcaacaaaccactaaaccctagaaatgttgatgttccc
ctttctcctcctcgatgcaaacccccaaaacctaaaagacacattcctaagcattgtgag
gggcgttttaaagtacctgcaatgagagatgatttcagcttgaatctattagattggagt
aaaaagaatgtagttactcttgcaatggacactagggttttaatttggaatccttcaatg
aaaacaaacactagtgcagaaattgtggatgatcatgaagaaggtttttttacaagtgtt
tgttggagcccagatggacgttttataaccattggtttggataattccactgtacagatt
tgggatgcattttcgcctaagcctagaaagggtattgagggatggcacagcggaattgtg
ggctcattggtttggaacggtcctattctaactacaggaggaacagacgggagaatagta
aatcatgatgttagagtgagatctcacatagttggaagtgtcaggggacacaaacaaggg
gtttgtgggctcaagtggtcaccttcaggtactcagttggcgagcggaggaaatgataat
gttgttcgcatatgggatatttcagttgattcttcagattcacgatctaccggttggcct
cacagatttgaggaacacacgacttctgtcagggcactgtcttggtgtccatttgaaaac
aatttattagcttctggtggaggtgaaggcgatcattgcattaagatgtggaacacacgc
acgggtgcatgcttgaattctgttgacacaggatcacaggtatgtgcattggcttggaac
aagaacgagcgtgagcttcttagctcccatggtttccctcataaccagcttaccttgtgg
atgtatccttccatgttgaagatgggtgagcttaacgatcacacctcgagggtgttgtac
atggcacagagtccagatgggtgtactgtcgcaactgcatctggagacaagactctgaga
ttttggaatgtttttgaaaccccaacagcagcaccaatcaaaaaatatgagtcataccct
tttagtgattttaacatccattga
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