KEGG   Trifolium pratense (red clover): 123889949
Entry
123889949         CDS       T08949                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tpra04121]
    123889949
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123889949
Enzymes [BR:tpra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     123889949
Ubiquitin system [BR:tpra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123889949
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    123889949
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_5 ResIII Prok-RING_4 zf-RING_UBOX zf-ANAPC11 zf-rbx1 AAA_34 Rad50_zn_hook zf-Nse RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 123889949
NCBI-ProteinID: XP_045795430
LinkDB
Position
LG6:complement(14615143..14620836)
AA seq 814 aa
MDDDDDSQQPFSQSQTEIYLAGFIMANIVGLRYYNGTINGREILGLVRDPLNQYDTNAIK
VLNTQSLQVGFIERSVAAVLSPLMDAHIIQIEGIVGTNNRSKFRIPCQIHIFSHLSSFDV
VHDAFIGSTVHFISHSDPSFTLSHSVAVQETRADLAAGTSAAAGNNKTKIKTLDQIFKLV
RENLAAKNNISEPLIPPSKLIKSELLQHQKEALGWLVHRENSDDLPPFWEEKEGGFVNVL
TNYQTSTRPESLRGGIFADGMGLGKTLTMLSLIAFDKMKCGKKRSRSRVEMNSTLIVCPP
SVISTWITQLEEHTNGGALKTYLYYGDRRTQDAEELRKYDIVLTTYATLGAELRCPDAAV
KKLGWRRIVLDEAHTIKNVNAGQSQAVIGLNGKRRWAVTGTPIQNGSYDLFSLMAFLHFE
PFSIKSYWQNLVQRPLTQGKQTGLSRLQVLMAAISLRRTKDTALVGLPPKIVETCYVELS
CEERKLYDDVKEEIKSLMMHYNSNDRLVYSYSTILSMILRLRQICTHLSMCPLDFKACLF
SSTDIEDVSKNPELLQTLVRMLQDGEDFDCPICLSPPTDIVITCCAHIFCRECILKTLQR
SNSSCPLCRRSLSESDLFSAPPESFKTDTTELCTPEVGSSTKVSTLIKLLTESRDQNPAT
KSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGTQNARQRAQVIDQFQLSKVDEPMILLASL
KSSSTGINLTSASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKIVKLIAKNSIEEKILQ
LQEMKKDITSRGSGKRSNDIAGMGINDLRFVLGE
NT seq 2445 nt   +upstreamnt  +downstreamnt
atggacgacgacgacgattcacaacaaccattctctcaatcccaaaccgaaatctactta
gcaggtttcataatggccaacatcgtcggcctaagatactacaacggcacaatcaacggt
cgtgaaatcctcggcctagttcgcgacccactcaaccaatacgacacaaacgccatcaaa
gttctcaacactcaatctctccaagtcggttttatcgaacgctccgtcgccgcggttctc
tcgccgctaatggatgctcatatcattcagattgaaggcattgttggcacaaacaatcgc
tctaagttccgtatcccttgtcagattcatattttctctcacttatcttcttttgatgtt
gttcatgatgcttttattggttccactgttcatttcatttcgcattctgatccttctttt
actctttctcattctgttgctgttcaagaaactcgagctgatttagccgccggaacaagc
gccgctgccggtaacaataaaactaaaatcaaaaccctagatcaaatattcaaactcgtt
cgcgaaaatctagctgctaaaaacaacatttctgaaccgttaattcctccttctaagtta
attaaatcagaattgcttcagcatcagaaggaagcattaggatggcttgttcatcgtgaa
aattccgatgatttaccgccgttttgggaagagaaagaggggggttttgttaatgtgtta
actaattatcaaactagtacacgaccggagtctcttcgcggagggatattcgcggatggg
atgggattagggaagactttgacaatgctttcgttgattgcttttgataaaatgaaatgt
gggaagaagagaagtaggagtagggtggagatgaatagtacattgattgtgtgtcctcct
tctgtgatttcgacgtggataactcaattggaagagcatactaatggtggtgcattgaag
acttatttgtattatggtgatagaaggactcaagatgctgaggaattgaggaaatatgat
attgtgttgactacttatgctactttgggagctgaattgcggtgtccggatgctgcggtg
aagaagttggggtggaggaggattgttttggatgaagcgcatacgattaagaatgttaat
gctggacagagtcaggctgttattggtttgaatggtaagaggagatgggctgttactggt
acacctattcagaatggttcttatgatttgttttctcttatggcttttttgcattttgag
cctttttctataaagagttattggcaaaacttggttcaacgcccgcttactcaaggcaaa
cagacagggcttagtcgattgcaggttttgatggcagcaatatcattacgaagaacaaaa
gacactgcgttggtggggcttccaccgaagatcgttgagacttgttatgttgaactttca
tgtgaagagcgtaaactgtatgacgatgttaaagaggaaataaagtcgcttatgatgcat
tataacagcaatgacagactagtgtatagttactccactatactaagtatgattctaaga
cttcgtcagatctgtactcatttgtcgatgtgccctttggatttcaaggcgtgtctattt
tcttcaactgatattgaagatgtttccaagaaccctgaattgctgcaaacattagttagg
atgctacaagatggtgaagattttgattgtccaatttgtttatctcctccaacggatatt
gtaattacatgctgtgctcatattttctgccgagaatgtattctgaaaactctacagcgc
agtaattccagttgtccactttgtcggcgctccctctcagaatccgacttattctcagcc
ccccctgaatctttcaagaccgatactactgaactgtgcacaccagaagtagggtcatcg
accaaagtctctactttgataaagcttcttacagaatcaagggatcaaaatccagctacc
aaatcagttgtattttcacaattccgtaaaatgctgctgctgttagaagaacctttaaaa
gcagctggctttaaaacattgcgtcttgatgggacacagaatgcaagacaaagagctcaa
gttattgaccaatttcaactctcaaaagttgatgagccaatgattctgcttgcaagtctc
aagtcttcaagtacaggtataaatcttacgtccgcctctagagtgtacttaatggagcca
tggtggaatccagcagttgaagaacaagcaatggatcgtgttcaccgcattggacagaaa
gaagaagtgaagattgttaaactgatagctaaaaatagcattgaagagaaaatattacag
ttgcaagagatgaagaaagatataacaagccgaggatctgggaagagatcaaatgatatt
gctggtatgggcataaatgatctccgttttgttttaggagagtag

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